A reproducible benchmark for ECG-to-text report generation: Leakage-safe evaluation, performance floors, and stress testing

Free-text report generation directly from ECG signals is an emerging task, but the field currently lacks a reproducible, leakage-safe evaluation protocol that makes results comparable across studies. To address this, we introduce both a benchmark and a reference implementation: the benchmark provides a leakage-safe evaluation protocol with concrete performance floors, and the reference implementation provides a tuned reference system that future ECG-to-text methods can be compared against. Our central contribution is the benchmark: an evaluation protocol on PTB-XL using the official, patient-exclusive splits, together with two architecture-agnostic statistical floors (a text-only lexical baseline and a class-conditional deterministic template baseline) and two model-dependent floors (a label-only neural baseline and a nearest-neighbor retrieval baseline) that quantify how much of a model’s score can be explained by report priors, rhythm-level shortcuts, and latent-space retrieval alone. We additionally include a random-split negative control that quantifies leakage-driven score inflation, and a stress test on a proprietary single-lead subcutaneous ECG dataset from implantable cardiac monitors, with analysis of site-level reporting bias. As the reference implementation, we adapt a standard encoder–decoder, image-captioning-style pipeline (ResNet encoder with LSTM or Transformer decoder) to signal-to-text on PTB-XL. Under this protocol, the reference implementation reaches METEOR 55.53% on PTB-XL, clearing all four floors; the primary prior model reported 24.51% under a leakage-prone random-split setup. We read these gains as improvements on this benchmark rather than evidence of clinically grounded morphological understanding: evaluation relies on lexical-overlap metrics over short, templated reports, and the margin over the strongest retrieval baseline is modest.

Authors

Institutions

Publication Details

Journal
Biomedical Signal Processing and Control
Published
2026-10-03
DOI
https://doi.org/10.1016/j.bspc.2026.111497
Primary Topic
ECG Monitoring and Analysis
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A reproducible benchmark for ECG-to-text report generation: Leakage-safe evaluation, performance floors, and stress testing

Tim Conrad, B. Diem, Antje Linnemann, Amnon Bleich
Biomedical Signal Processing and Control
ECG Monitoring and Analysis
article

A reproducible benchmark for ECG-to-text report generation: Leakage-safe evaluation, performance floors, and stress testing

Tim Conrad, B. Diem, Antje Linnemann, Amnon Bleich
article en

Abstract

Free-text report generation directly from ECG signals is an emerging task, but the field currently lacks a reproducible, leakage-safe evaluation protocol that makes results comparable across studies. To address this, we introduce both a benchmark and a reference implementation: the benchmark provides a leakage-safe evaluation protocol with concrete performance floors, and the reference implementation provides a tuned reference system that future ECG-to-text methods can be compared against. Our central contribution is the benchmark: an evaluation protocol on PTB-XL using the official, patient-exclusive splits, together with two architecture-agnostic statistical floors (a text-only lexical baseline and a class-conditional deterministic template baseline) and two model-dependent floors (a label-only neural baseline and a nearest-neighbor retrieval baseline) that quantify how much of a model’s score can be explained by report priors, rhythm-level shortcuts, and latent-space retrieval alone. We additionally include a random-split negative control that quantifies leakage-driven score inflation, and a stress test on a proprietary single-lead subcutaneous ECG dataset from implantable cardiac monitors, with analysis of site-level reporting bias. As the reference implementation, we adapt a standard encoder–decoder, image-captioning-style pipeline (ResNet encoder with LSTM or Transformer decoder) to signal-to-text on PTB-XL. Under this protocol, the reference implementation reaches METEOR 55.53% on PTB-XL, clearing all four floors; the primary prior model reported 24.51% under a leakage-prone random-split setup. We read these gains as improvements on this benchmark rather than evidence of clinically grounded morphological understanding: evaluation relies on lexical-overlap metrics over short, templated reports, and the margin over the strongest retrieval baseline is modest.

Biomedical Signal Processing and ControlVol. 130
Zuse Institute Berlin (DE), Biotronik (Germany) (DE), Berlin Institute for the Foundations of Learning and Data (DE)
Openalex Percentile: Top 11%
ECG Monitoring and Analysis
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.