Machine learning clustering of multidimensional clinical features identifies four prognostically distinct sepsis subtypes

Sepsis is highly heterogeneous, and traditional “one-size-fits-all” treatment approaches are insufficient for optimal risk stratification. Using the MIMIC-III database, we employed unsupervised machine learning (k-means clustering) based on eight key clinical features (age, SOFA score, lactate, urine output, systolic blood pressure, heart rate, creatinine, and BUN) to identify clinically distinct subtypes among 4,559 sepsis patients, with clustering validated via principal component and silhouette analyses. Four distinct subtypes were identified: Young Low-risk (30.4%; 30-day mortality 7.7%), Elderly Stable (49.4%; 18.0%), High-risk (9.7%; 25.9%), and Critical (10.6%; 54.3%). Significant differences were observed among subtypes in age distribution, organ dysfunction severity, and prognosis (log-rank P < 0.001). Cluster assignment added statistically significant prognostic information beyond SOFA score and age (AUC increment 0.0126, DeLong P = 3.34 × 10⁻⁵; category NRI 0.0330, 95% CI 0.0056–0.0543). Cluster analysis based on multidimensional clinical characteristics can effectively identify sepsis patient subtypes with distinct prognoses, providing a pragmatic framework for risk stratification in sepsis; the incremental prognostic value beyond conventional severity scores warrants validation in prospective cohorts.

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Publication Details

Journal
Scientific Reports
Published
2026-10-03
DOI
https://doi.org/10.1038/s41598-026-74359-w
Primary Topic
Sepsis Diagnosis and Treatment
Type
article
Field-Weighted Citation Impact
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article

Machine learning clustering of multidimensional clinical features identifies four prognostically distinct sepsis subtypes

Binbin Zhu, Yiwei Zhang, Changshun Huang, Yukun Huang et al.
Scientific Reports
Sepsis Diagnosis and Treatment
article

Machine learning clustering of multidimensional clinical features identifies four prognostically distinct sepsis subtypes

Binbin Zhu, Yiwei Zhang, Changshun Huang, Yukun Huang, Zhao Rui, Zhang Yingli, Xirou Wu, Xiuqing Wu, Rui Zhang
article en

Abstract

Sepsis is highly heterogeneous, and traditional “one-size-fits-all” treatment approaches are insufficient for optimal risk stratification. Using the MIMIC-III database, we employed unsupervised machine learning (k-means clustering) based on eight key clinical features (age, SOFA score, lactate, urine output, systolic blood pressure, heart rate, creatinine, and BUN) to identify clinically distinct subtypes among 4,559 sepsis patients, with clustering validated via principal component and silhouette analyses. Four distinct subtypes were identified: Young Low-risk (30.4%; 30-day mortality 7.7%), Elderly Stable (49.4%; 18.0%), High-risk (9.7%; 25.9%), and Critical (10.6%; 54.3%). Significant differences were observed among subtypes in age distribution, organ dysfunction severity, and prognosis (log-rank P < 0.001). Cluster assignment added statistically significant prognostic information beyond SOFA score and age (AUC increment 0.0126, DeLong P = 3.34 × 10⁻⁵; category NRI 0.0330, 95% CI 0.0056–0.0543). Cluster analysis based on multidimensional clinical characteristics can effectively identify sepsis patient subtypes with distinct prognoses, providing a pragmatic framework for risk stratification in sepsis; the incremental prognostic value beyond conventional severity scores warrants validation in prospective cohorts.

Scientific Reports
Ningbo University (CN), Chinese University of Hong Kong, Shenzhen (CN), Ningbo University Affiliated Hospital (CN), Ningbo First Hospital (CN)
Openalex Percentile: Top 11%
Sepsis Diagnosis and Treatment
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Machine learning clustering of multidimensional clinical features identifies four prognostically distinct sepsis subtypes — Binbin Zhu, Yiwei Zhang, et al. · Scientific Reports (2026) | TGRS Research Map | TGRS