Adaptive Graph Sparsification for Efficient Graph Neural Networks

This preprint presents an experimental study of graph sparsification for graph neural networks. The study evaluates multiple edge-selection strategies, including random, degree-based, structural, feature-based, and multi-criteria sparsification, across the Cora, CiteSeer, PubMed, Chameleon, and Squirrel datasets. The experiments examine the relationship between edge retention and predictive performance using test accuracy and macro-F1, together with training and computational time. Pairwise ablation experiments further evaluate the contributions of structural similarity, node-feature similarity, and local connectivity components within the proposed multi-criteria framework. The study also analyzes graph characteristics and computational performance across datasets with different structural and homophily properties. Results are reported across multiple retention ratios and random seeds. The uploaded document contains the research methodology, experimental results, ablation analysis, discussion, limitations, and references.

Authors

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-10-01
DOI
https://doi.org/10.5281/zenodo.23073589
Primary Topic
Advanced Graph Neural Networks
Type
preprint
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preprint

Adaptive Graph Sparsification for Efficient Graph Neural Networks

Avaneesh Shinde
Zenodo (CERN European Organization for Nuclear Research)
Advanced Graph Neural Networks
preprint

Adaptive Graph Sparsification for Efficient Graph Neural Networks

Avaneesh Shinde
preprint en

Abstract

This preprint presents an experimental study of graph sparsification for graph neural networks. The study evaluates multiple edge-selection strategies, including random, degree-based, structural, feature-based, and multi-criteria sparsification, across the Cora, CiteSeer, PubMed, Chameleon, and Squirrel datasets. The experiments examine the relationship between edge retention and predictive performance using test accuracy and macro-F1, together with training and computational time. Pairwise ablation experiments further evaluate the contributions of structural similarity, node-feature similarity, and local connectivity components within the proposed multi-criteria framework. The study also analyzes graph characteristics and computational performance across datasets with different structural and homophily properties. Results are reported across multiple retention ratios and random seeds. The uploaded document contains the research methodology, experimental results, ablation analysis, discussion, limitations, and references.

Zenodo (CERN European Organization for Nuclear Research)
Advanced Graph Neural Networks
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Adaptive Graph Sparsification for Efficient Graph Neural Networks — Avaneesh Shinde · Zenodo (CERN European Organization for Nuclear Research) (2026) | TGRS Research Map | TGRS