A head-mounted open-source light field microscope for large volumetric Ca2+ imaging during exploratory and social behavior in mice

Capturing neuronal activity during natural behaviors in unrestrained animals is critical for understanding brain function, yet existing imaging systems struggle to combine volumetric field-of-view (v-FOV), high resolution, depth, and usability. We present MiniLFMv2, a lightweight, next-generation miniaturized light field microscope enabling volumetric imaging with a v-FOV of ⌀1 × 0.2 mm 3 , volume rates of up to 30 Hz and depth to ∼350–400 μm. MiniLFMv2 achieves near-diffraction-limited performance, with a working distance of 1 mm. Its custom aspheric lenses and electrically tunable lens eliminate the need for GRIN optics, improving compatibility with cranial window imaging. Applying MiniLFMv2 in freely moving mice, we captured activity from hundreds of parietal cortex neurons at depths up to ∼400 μm with minimal impact on mobility. During exploratory and social behaviors, we identified subpopulations selectively tuned to locomotion, rearing, and social investigation. MiniLFMv2 offers a powerful tool for investigating neural dynamics during naturalistic and social behaviors.

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Publication Details

Journal
Cell Reports
Published
2026-09-29
DOI
https://doi.org/10.1016/j.celrep.2026.118066
Primary Topic
Advanced Fluorescence Microscopy Techniques
Type
article
Field-Weighted Citation Impact
0.00

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article

A head-mounted open-source light field microscope for large volumetric Ca2+ imaging during exploratory and social behavior in mice

Alipasha Vaziri, Hossein Sarafraz, Tobias Nöbauer, Hao Li
Cell Reports
Advanced Fluorescence Microscopy Techniques
article

A head-mounted open-source light field microscope for large volumetric Ca2+ imaging during exploratory and social behavior in mice

Alipasha Vaziri, Hossein Sarafraz, Tobias Nöbauer, Hao Li
article en

Abstract

Capturing neuronal activity during natural behaviors in unrestrained animals is critical for understanding brain function, yet existing imaging systems struggle to combine volumetric field-of-view (v-FOV), high resolution, depth, and usability. We present MiniLFMv2, a lightweight, next-generation miniaturized light field microscope enabling volumetric imaging with a v-FOV of ⌀1 × 0.2 mm 3 , volume rates of up to 30 Hz and depth to ∼350–400 μm. MiniLFMv2 achieves near-diffraction-limited performance, with a working distance of 1 mm. Its custom aspheric lenses and electrically tunable lens eliminate the need for GRIN optics, improving compatibility with cranial window imaging. Applying MiniLFMv2 in freely moving mice, we captured activity from hundreds of parietal cortex neurons at depths up to ∼400 μm with minimal impact on mobility. During exploratory and social behaviors, we identified subpopulations selectively tuned to locomotion, rearing, and social investigation. MiniLFMv2 offers a powerful tool for investigating neural dynamics during naturalistic and social behaviors.

Cell ReportsVol. 45(10)
Rockefeller University (US)
Kavli Foundation, National Institute of Neurological Disorders and Stroke, Division of Integrative Organismal Systems
Reduced inequalities
Openalex Percentile: Top 14%
Advanced Fluorescence Microscopy Techniques
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