Stage-Specific Rewiring of PI3K–AKT Signaling During Serous Ovarian Cancer Progression: An Integrated Transcriptomic and Network Analysis

High-grade serous ovarian cancer (HGSOC) exhibits substantial molecular heterogeneity during disease progression. We investigated stage-specific changes in PI3K–AKT-associated signaling programs from early tumorigenesis to metastatic disease. Two publicly available microarray datasets, GSE36668 (normal, borderline, and carcinoma; n = 4 per group) and GSE73064 (primary tumor, ascites, and metastasis; n = 5 per group), were analyzed using differential expression, gene set enrichment, protein–protein interaction network analysis, and hub-gene identification. PI3K–AKT-associated genes were subsequently characterized by functional enrichment, exploratory survival analysis using KM Plotter, and independent stage-stratified validation in TCGA-OV. Survival analyses were considered exploratory because KM Plotter-derived p-values were not adjusted for multiple testing. Carcinoma-associated genes were predominantly linked to extracellular matrix remodeling and receptor tyrosine kinase-mediated PI3K signaling. Ascites-associated genes were enriched in integrin-dependent signaling and microenvironmental adaptation, whereas metastasis-associated genes formed inflammatory and survival-related modules involving IL6, JAK1, PTK2, AREG, EIF4E, and HSP90B1. In stage-stratified TCGA-OV analysis, all seven metastasis-associated genes were significantly associated with overall survival in Stage IV disease, supporting the prognostic relevance of the metastatic module. HGSOC progression is characterized by stage-associated reorganization of PI3K–AKT-related signaling rather than uniform pathway activation. The identified molecular programs suggest a transition from RTK-associated proliferative signaling in carcinoma to integrin-dependent survival adaptation in ascites and inflammatory survival signaling during metastasis.

Authors

Institutions

Publication Details

Journal
International Journal of Molecular Sciences
Published
2026-09-29
DOI
https://doi.org/10.3390/ijms27198700
Primary Topic
Ferroptosis and cancer prognosis
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
article

Stage-Specific Rewiring of PI3K–AKT Signaling During Serous Ovarian Cancer Progression: An Integrated Transcriptomic and Network Analysis

Iman Jaafar Abdulrahman, Hossein Azizi, Thomas Skutella, Sana Ismael Ameen
International Journal of Molecular Sciences
Ferroptosis and cancer prognosis
article

Stage-Specific Rewiring of PI3K–AKT Signaling During Serous Ovarian Cancer Progression: An Integrated Transcriptomic and Network Analysis

Iman Jaafar Abdulrahman, Hossein Azizi, Thomas Skutella, Sana Ismael Ameen
article en

Abstract

High-grade serous ovarian cancer (HGSOC) exhibits substantial molecular heterogeneity during disease progression. We investigated stage-specific changes in PI3K–AKT-associated signaling programs from early tumorigenesis to metastatic disease. Two publicly available microarray datasets, GSE36668 (normal, borderline, and carcinoma; n = 4 per group) and GSE73064 (primary tumor, ascites, and metastasis; n = 5 per group), were analyzed using differential expression, gene set enrichment, protein–protein interaction network analysis, and hub-gene identification. PI3K–AKT-associated genes were subsequently characterized by functional enrichment, exploratory survival analysis using KM Plotter, and independent stage-stratified validation in TCGA-OV. Survival analyses were considered exploratory because KM Plotter-derived p-values were not adjusted for multiple testing. Carcinoma-associated genes were predominantly linked to extracellular matrix remodeling and receptor tyrosine kinase-mediated PI3K signaling. Ascites-associated genes were enriched in integrin-dependent signaling and microenvironmental adaptation, whereas metastasis-associated genes formed inflammatory and survival-related modules involving IL6, JAK1, PTK2, AREG, EIF4E, and HSP90B1. In stage-stratified TCGA-OV analysis, all seven metastasis-associated genes were significantly associated with overall survival in Stage IV disease, supporting the prognostic relevance of the metastatic module. HGSOC progression is characterized by stage-associated reorganization of PI3K–AKT-related signaling rather than uniform pathway activation. The identified molecular programs suggest a transition from RTK-associated proliferative signaling in carcinoma to integrin-dependent survival adaptation in ascites and inflammatory survival signaling during metastasis.

International Journal of Molecular SciencesVol. 27(19)
Heidelberg University (DE), Amol University of Special Modern Technologies (IR), Koya University (IQ), University of Duhok (IQ)
Good health and well-being
Openalex Percentile: Top 12%
Ferroptosis and cancer prognosis
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.