Hydrogen-bonded supramolecular assembly of didodecylmelamine and thymine at the air/water interface studied by heterodyne-detected vibrational sum frequency generation

Langmuir monolayers of didodecylmelamine (2C12mela) on thymine aqueous solutions were studied by in situ heterodyne-detected vibrational sum frequency generation (HD-VSFG) spectroscopy. The HD-VSFG spectrum of the monolayer on a 10 mM thymine aqueous solution exhibited a positive band at 1665 cm-1, a negative band at 1710 cm-1, and an extremely broad, positive band at the low wavenumber side (2600-2850 cm-1) of the CH, NH, and OH stretching region. The three bands were assigned to the 4-carbonyl, 2-carbonyl, and strongly hydrogen-bonded NH stretching modes of thymine. The signs of the bands indicate that thymine molecules were oriented with the oxygen atoms of the 4-carbonyl pointing downward, the oxygen atoms of the 2-carbonyl pointing upward, and the hydrogen atoms of the NH groups of thymine pointing upward along the interface normal, respectively. The spectral data, supported by finite-cluster spectral simulations, favor a polymer-like supramolecular structure over trimeric models. In this model, thymine molecules are bound to neighboring 2C12mela molecules in an ∼1:1 arrangement, with their methyl groups pointing downward along the interface normal and their 4-carbonyl groups sharing a common lateral orientation along the supramolecular chain.

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Journal
The Journal of Chemical Physics
Published
2026-09-28
DOI
https://doi.org/10.1063/5.0350367
Primary Topic
Spectroscopy and Quantum Chemical Studies
Type
article
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article

Hydrogen-bonded supramolecular assembly of didodecylmelamine and thymine at the air/water interface studied by heterodyne-detected vibrational sum frequency generation

Taka‐aki Ishibashi, Katsuhiko Ariga, Shuhei Yamada
The Journal of Chemical Physics
Spectroscopy and Quantum Chemical Studies
article

Hydrogen-bonded supramolecular assembly of didodecylmelamine and thymine at the air/water interface studied by heterodyne-detected vibrational sum frequency generation

Taka‐aki Ishibashi, Katsuhiko Ariga, Shuhei Yamada
article en

Abstract

Langmuir monolayers of didodecylmelamine (2C12mela) on thymine aqueous solutions were studied by in situ heterodyne-detected vibrational sum frequency generation (HD-VSFG) spectroscopy. The HD-VSFG spectrum of the monolayer on a 10 mM thymine aqueous solution exhibited a positive band at 1665 cm-1, a negative band at 1710 cm-1, and an extremely broad, positive band at the low wavenumber side (2600-2850 cm-1) of the CH, NH, and OH stretching region. The three bands were assigned to the 4-carbonyl, 2-carbonyl, and strongly hydrogen-bonded NH stretching modes of thymine. The signs of the bands indicate that thymine molecules were oriented with the oxygen atoms of the 4-carbonyl pointing downward, the oxygen atoms of the 2-carbonyl pointing upward, and the hydrogen atoms of the NH groups of thymine pointing upward along the interface normal, respectively. The spectral data, supported by finite-cluster spectral simulations, favor a polymer-like supramolecular structure over trimeric models. In this model, thymine molecules are bound to neighboring 2C12mela molecules in an ∼1:1 arrangement, with their methyl groups pointing downward along the interface normal and their 4-carbonyl groups sharing a common lateral orientation along the supramolecular chain.

The Journal of Chemical PhysicsVol. 165(12)
University of Tsukuba (JP), National Institute for Materials Science (JP), The University of Tokyo (JP)
Clean water and sanitation
Openalex Percentile: Top 14%
Spectroscopy and Quantum Chemical Studies
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