Exploratory digital alchemy for colloidal crystal discovery

Abstract Digital alchemy (DA), introduced by Van Anders et al., is a statistical mechanics-based generalized thermodynamic ensemble method that employs computer simulations to optimize colloidal particle design. This approach applies the principles of statistical mechanics to predict and tailor particle attributes that lead to desired self-assembled structures or material properties. However, as an inverse design method, its main limitation is that the target structure must be known a priori. Therefore, the optimal design from DA does not guarantee that the targeted structure is the most stable or the only stable one. This highlights the importance of forward design with an exploratory scheme for optimizing novel colloid designs, which becomes more suitable in such cases. In this paper, we introduce exploratory DA (EDA), an enhanced forward design scheme that begins by releasing the constraint of the target crystal from DA, followed by an exploration-oriented bias that has been extensively used in enhanced sampling methods such as metadynamics (MetaD). We demonstrate the utility of EDA through examples involving particles interacting via a two-dimensional Lennard–Jones Gauss potential (LJGP) and a 3D-OPP. We applied EDA to study the free energy landscapes given different potential parameters of LJGP at different temperatures. With the exploratory scheme, we’ve also successfully identified a wide range of OPP potential parameters that stabilize metastable Frank–Kasper phases. Our approach fuses the standard DA framework with metadynamics, which could potentially be useful for studying alchemical reactions in a generalized ensemble.

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Publication Details

Journal
npj Soft Matter
Published
2026-09-25
DOI
https://doi.org/10.1038/s44431-026-00048-3
Primary Topic
Machine Learning in Materials Science
Type
article
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Exploratory digital alchemy for colloidal crystal discovery

Sharon C. Glotzer, Sun-Ting Tsai, Shih-Kuang Lee Alex
npj Soft Matter
Machine Learning in Materials Science
article

Exploratory digital alchemy for colloidal crystal discovery

Sharon C. Glotzer, Sun-Ting Tsai, Shih-Kuang Lee Alex
article en

Abstract

Abstract Digital alchemy (DA), introduced by Van Anders et al., is a statistical mechanics-based generalized thermodynamic ensemble method that employs computer simulations to optimize colloidal particle design. This approach applies the principles of statistical mechanics to predict and tailor particle attributes that lead to desired self-assembled structures or material properties. However, as an inverse design method, its main limitation is that the target structure must be known a priori. Therefore, the optimal design from DA does not guarantee that the targeted structure is the most stable or the only stable one. This highlights the importance of forward design with an exploratory scheme for optimizing novel colloid designs, which becomes more suitable in such cases. In this paper, we introduce exploratory DA (EDA), an enhanced forward design scheme that begins by releasing the constraint of the target crystal from DA, followed by an exploration-oriented bias that has been extensively used in enhanced sampling methods such as metadynamics (MetaD). We demonstrate the utility of EDA through examples involving particles interacting via a two-dimensional Lennard–Jones Gauss potential (LJGP) and a 3D-OPP. We applied EDA to study the free energy landscapes given different potential parameters of LJGP at different temperatures. With the exploratory scheme, we’ve also successfully identified a wide range of OPP potential parameters that stabilize metastable Frank–Kasper phases. Our approach fuses the standard DA framework with metadynamics, which could potentially be useful for studying alchemical reactions in a generalized ensemble.

npj Soft MatterVol. 2(1)
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Openalex Percentile: Top 25%
Machine Learning in Materials Science
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