Coprinopsis cinerea Enhances Corn Straw Degradation Efficiency in Association with Remodeled Bacterial Communities and Metabolic Pathways

Coprinopsis cinerea (C. cinerea) is a well-recognized model fungus for lignocellulose degradation, yet its microecological mechanism in regulating native microbiota during straw decomposition remains poorly understood. We constructed a physically separated two-layer solid-state microcosm with an upper sterilized corn straw layer and a lower unsterilized field soil layer retaining native bacterial communities, and collected samples on days 15, 30 and 45 post-inoculation for 16S rRNA sequencing, untargeted metabolomics and co-occurrence network analysis. Inoculation did not increase overall bacterial richness and temporarily reduced ASV richness at day 30, but induced marked community structure shifts: enrichment of lignocellulolytic taxa Pseudomonas and Flavobacterium, reduction in Acidobacteriota, and a denser, more synergistic microbial network at the mid-stage. Metabolically, inoculation enhanced early phenylalanine metabolism linked to lignin degradation, and mid- to late-stage ABC transporter, glycolysis/gluconeogenesis and purine metabolism pathways; by day 45, cellulose and hemicellulose degradation rates were 13% and 29% higher in the inoculated group. In conclusion, C. cinerea enhances straw lignocellulose degradation via multi-level microecological remodeling of bacterial communities and metabolic pathways as well as potential direct enzymatic contributions, providing a reference for developing microbiome-modulating fungal inoculants. This study is limited to bacterial responses, with fungal community dynamics uncharacterized.

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Journal
Microorganisms
Published
2026-09-24
DOI
https://doi.org/10.3390/microorganisms14102159
Primary Topic
Enzyme-mediated dye degradation
Type
article
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article

Coprinopsis cinerea Enhances Corn Straw Degradation Efficiency in Association with Remodeled Bacterial Communities and Metabolic Pathways

Bing Wang, Changchun Li, Shuai Wang, Furan Zhang et al.
Microorganisms
Enzyme-mediated dye degradation
article

Coprinopsis cinerea Enhances Corn Straw Degradation Efficiency in Association with Remodeled Bacterial Communities and Metabolic Pathways

Bing Wang, Changchun Li, Shuai Wang, Furan Zhang, Su Han, Jian Luan
article en

Abstract

Coprinopsis cinerea (C. cinerea) is a well-recognized model fungus for lignocellulose degradation, yet its microecological mechanism in regulating native microbiota during straw decomposition remains poorly understood. We constructed a physically separated two-layer solid-state microcosm with an upper sterilized corn straw layer and a lower unsterilized field soil layer retaining native bacterial communities, and collected samples on days 15, 30 and 45 post-inoculation for 16S rRNA sequencing, untargeted metabolomics and co-occurrence network analysis. Inoculation did not increase overall bacterial richness and temporarily reduced ASV richness at day 30, but induced marked community structure shifts: enrichment of lignocellulolytic taxa Pseudomonas and Flavobacterium, reduction in Acidobacteriota, and a denser, more synergistic microbial network at the mid-stage. Metabolically, inoculation enhanced early phenylalanine metabolism linked to lignin degradation, and mid- to late-stage ABC transporter, glycolysis/gluconeogenesis and purine metabolism pathways; by day 45, cellulose and hemicellulose degradation rates were 13% and 29% higher in the inoculated group. In conclusion, C. cinerea enhances straw lignocellulose degradation via multi-level microecological remodeling of bacterial communities and metabolic pathways as well as potential direct enzymatic contributions, providing a reference for developing microbiome-modulating fungal inoculants. This study is limited to bacterial responses, with fungal community dynamics uncharacterized.

MicroorganismsVol. 14(10)
Jilin Normal University (CN)
Openalex Percentile: Top 13%
Enzyme-mediated dye degradation
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