Supporting Materials for Plant Imaging Ecosystem (PIE) study: design files, software, supplementary files

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-09-17
DOI
https://doi.org/10.5281/zenodo.22212598
Primary Topic
Cell Image Analysis Techniques
Type
article
Field-Weighted Citation Impact
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article

Supporting Materials for Plant Imaging Ecosystem (PIE) study: design files, software, supplementary files

Anita Mahadevan‐Jansen, Andrea K. Locke, Bryan A. Millis, Miguel de Jesus et al.
Zenodo (CERN European Organization for Nuclear Research)
Cell Image Analysis Techniques
article

Supporting Materials for Plant Imaging Ecosystem (PIE) study: design files, software, supplementary files

Anita Mahadevan‐Jansen, Andrea K. Locke, Bryan A. Millis, Miguel de Jesus, Ali Taheri, Esteban Zamora, Kuber Shivashakarappa, John Kozub, Jaedyn Alford
article en

Abstract

This repository contains supporting materials for the HardwareX article submission "A Modular, Open-Hardware-Based Plant Imaging Ecosystem (PIE) for Long-Term Imaging of High-Impact, Mature Living Plant Tissues via Oblique Plane Illumination Microscopy", by de Jesus & colleagues (2026). This specifically includes design files, software, analysis scripts, open-source license declarations, the bill of materials and connectivity diagrams, supplementary movies, and the source data. PIE_Design_Files (A,P).zip contains assembly files (A##) and parts (P##) for the hardware modules of the PIE. PIE_Software_Files (C).zip contains operating firmware and data-logging scripts (C##) used by hardware modules of the PIE. PIE_Analysis_Code (N).zip contains analysis scripts (N##) used to produce the various data tables reflected in Source data (2026-09-01).xlsx and the Figure panels of the manuscript. PIE_Supplementary_Movies.zip contains three supplementary movies cited in the manuscript. Bill of Materials (2026-08-31).xlsx and Device Connectivity Tables (2026-09-06).xlsx contain relevant construction documentation. Hardware design files are released under CERN-OHL-W-2.0. Original software, firmware, and analysis code are released under the MIT License.

Zenodo (CERN European Organization for Nuclear Research)
Vanderbilt University (US), Tennessee State University (US)
Life in Land
Openalex Percentile: Top 12%
Cell Image Analysis Techniques
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