Semantic Neighborhood Fidelity of NN-Descent Graphs for Text Embeddings

Approximate 𝑘 nearest neighbor (𝑘-NN) graphs are widely used to support similarity search, content organization, recommendation, and graph-based learning over text embeddings. Their quality is commonly assessed through Recall@𝑘, which measures agreement with exact nearest-neighbor identities. However, Recall@𝑘 does not indicate whether approximate neighborhoods preserve the category-level agreement observed in exact neighborhoods. This paper investigates approximate cosine 𝑘-NN graphs constructed with NN-Descent over labeled text embedding collections. The evaluation compares exact-neighbor recovery with category-level agreement among approximate neighbors and defines relative semantic neighborhood fidelity, denoted Fidelity@𝑘, with respect to the category consistency of the corresponding exact 𝑘-NN graph. By varying neighborhood size and examining NN-Descent refinement iterations, the study characterizes the relationship between exact-neighbor recovery and category-level neighborhood preservation. Across the evaluated datasets and embedding models, Fidelity@𝑘 remains consistently higher than Recall@𝑘, showing that approximate graphs can preserve category-level neighborhood agreement even when exact-neighbor recovery remains incomplete.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-09-17
DOI
https://doi.org/10.5281/zenodo.22820508
Primary Topic
Advanced Graph Neural Networks
Type
article
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Semantic Neighborhood Fidelity of NN-Descent Graphs for Text Embeddings

Víctor Macêdo Alexandrino
Zenodo (CERN European Organization for Nuclear Research)
Advanced Graph Neural Networks
article

Semantic Neighborhood Fidelity of NN-Descent Graphs for Text Embeddings

Víctor Macêdo Alexandrino
article en

Abstract

Approximate 𝑘 nearest neighbor (𝑘-NN) graphs are widely used to support similarity search, content organization, recommendation, and graph-based learning over text embeddings. Their quality is commonly assessed through Recall@𝑘, which measures agreement with exact nearest-neighbor identities. However, Recall@𝑘 does not indicate whether approximate neighborhoods preserve the category-level agreement observed in exact neighborhoods. This paper investigates approximate cosine 𝑘-NN graphs constructed with NN-Descent over labeled text embedding collections. The evaluation compares exact-neighbor recovery with category-level agreement among approximate neighbors and defines relative semantic neighborhood fidelity, denoted Fidelity@𝑘, with respect to the category consistency of the corresponding exact 𝑘-NN graph. By varying neighborhood size and examining NN-Descent refinement iterations, the study characterizes the relationship between exact-neighbor recovery and category-level neighborhood preservation. Across the evaluated datasets and embedding models, Fidelity@𝑘 remains consistently higher than Recall@𝑘, showing that approximate graphs can preserve category-level neighborhood agreement even when exact-neighbor recovery remains incomplete.

Zenodo (CERN European Organization for Nuclear Research)
Openalex Percentile: Top 8%
Advanced Graph Neural Networks
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Semantic Neighborhood Fidelity of NN-Descent Graphs for Text Embeddings — Víctor Macêdo Alexandrino · Zenodo (CERN European Organization for Nuclear Research) (2026) | TGRS Research Map | TGRS