Metagenomic and culture‐based insights into host and plasmid contexts of high‐risk ARGs in poultry farm environments

Shotgun metagenomics and culture-based isolate genomics revealed position-associated high-risk antibiotic resistance genes (ARGs) signals across poultry manure piles and surrounding soils. Culture-confirmed Enterobacteriaceae and IncHI2A-related blaNDM-5 plasmid backgrounds further highlight priority host-ARG-plasmid contexts for farm antimicrobial resistance (AMR) surveillance.

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Publication Details

Journal
iMetaOmics.
Published
2026-09-17
DOI
https://doi.org/10.1002/imo2.70143
Primary Topic
Pharmaceutical and Antibiotic Environmental Impacts
Type
article
Field-Weighted Citation Impact
0.00
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article

Metagenomic and culture‐based insights into host and plasmid contexts of high‐risk ARGs in poultry farm environments

Zhenlong Wu, Lianwei Ye, Yiwen Yang, Yaling Wang et al.
iMetaOmics.
Pharmaceutical and Antibiotic Environmental Impacts
article

Metagenomic and culture‐based insights into host and plasmid contexts of high‐risk ARGs in poultry farm environments

Zhenlong Wu, Lianwei Ye, Yiwen Yang, Yaling Wang, Sheng Chen, Linan HE
article en

Abstract

Shotgun metagenomics and culture-based isolate genomics revealed position-associated high-risk antibiotic resistance genes (ARGs) signals across poultry manure piles and surrounding soils. Culture-confirmed Enterobacteriaceae and IncHI2A-related blaNDM-5 plasmid backgrounds further highlight priority host-ARG-plasmid contexts for farm antimicrobial resistance (AMR) surveillance.

iMetaOmics.
Hong Kong Polytechnic University (HK), Shenzhen Polytechnic University (CN), Wenzhou Medical University (CN), Wenzhou Municipal Sci-Tech Bureau (CN), Feed Research Institute (CN), China Agricultural University (CN)
Zero hunger
Openalex Percentile: Top 22%
Pharmaceutical and Antibiotic Environmental Impacts
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Metagenomic and culture‐based insights into host and plasmid contexts of high‐risk ARGs in poultry farm environments — Zhenlong Wu, Lianwei Ye, et al. · iMetaOmics. (2026) | TGRS Research Map | TGRS