Storage treatment and diluent cause inconsistencies in commonly used fluorometric microplate enzyme assays conducted with saltmarsh soils

Abstract Fluorometric enzyme assays are a tool for determining potential enzyme activity in soils. A wide array of methodological approaches is adopted by different studies, making comparisons difficult. An important consideration is whether assay conditions replicate the environment of the samples or optimize potential enzyme activity. Related is whether buffer or distilled water is used as a diluent when creating the soil slurry used in the assay. Buffer is favored for maintaining a stable pH while using distilled water more closely replicates environmental conditions by allowing the sample to regulate its own pH. Furthermore, sample storage before and after slurry creation is a factor that varies widely. Using soil from two saltmarshes, highly dynamic ecosystems experiencing extreme conditions such as waterlogged soils and high salinity, we compared the impacts of creating slurries with phosphate buffer, distilled water, and saline saltmarsh creek water and of storing slurries at 4°C and −20°C before analysis. Assay outcomes were highly sensitive to these pre‐assay treatments and that sensitivity was large enough to affect relative comparisons among samples. There were notable differences between diluents that could drive these outcomes. First, pH fluctuations occurred when buffer was not the diluent. Second, the actual pH of the assays differed by as much as 1.04. Third, when pH‐dependent 4‐methylumbelliferone was the fluorophore, quench effects were greater in distilled water controls than in assays with soil particles present because of pH differences arising in an unbuffered system. In conclusion, the methodological differences tested here could compromise comparability among studies.

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Publication Details

Journal
Limnology and Oceanography Methods
Published
2026-09-17
DOI
https://doi.org/10.1002/lom3.70093
Primary Topic
Coastal wetland ecosystem dynamics
Type
article
Field-Weighted Citation Impact
0.00

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article

Storage treatment and diluent cause inconsistencies in commonly used fluorometric microplate enzyme assays conducted with saltmarsh soils

Stefanie Nolte, Catrina Gore, Julian Mittmann-Goesele, Laura Lehtovirta‐Morley et al.
Limnology and Oceanography Methods
Coastal wetland ecosystem dynamics
article

Storage treatment and diluent cause inconsistencies in commonly used fluorometric microplate enzyme assays conducted with saltmarsh soils

Stefanie Nolte, Catrina Gore, Julian Mittmann-Goesele, Laura Lehtovirta‐Morley, Peter Mueller
article en

Abstract

Abstract Fluorometric enzyme assays are a tool for determining potential enzyme activity in soils. A wide array of methodological approaches is adopted by different studies, making comparisons difficult. An important consideration is whether assay conditions replicate the environment of the samples or optimize potential enzyme activity. Related is whether buffer or distilled water is used as a diluent when creating the soil slurry used in the assay. Buffer is favored for maintaining a stable pH while using distilled water more closely replicates environmental conditions by allowing the sample to regulate its own pH. Furthermore, sample storage before and after slurry creation is a factor that varies widely. Using soil from two saltmarshes, highly dynamic ecosystems experiencing extreme conditions such as waterlogged soils and high salinity, we compared the impacts of creating slurries with phosphate buffer, distilled water, and saline saltmarsh creek water and of storing slurries at 4°C and −20°C before analysis. Assay outcomes were highly sensitive to these pre‐assay treatments and that sensitivity was large enough to affect relative comparisons among samples. There were notable differences between diluents that could drive these outcomes. First, pH fluctuations occurred when buffer was not the diluent. Second, the actual pH of the assays differed by as much as 1.04. Third, when pH‐dependent 4‐methylumbelliferone was the fluorophore, quench effects were greater in distilled water controls than in assays with soil particles present because of pH differences arising in an unbuffered system. In conclusion, the methodological differences tested here could compromise comparability among studies.

Limnology and Oceanography Methods
University of East Anglia (GB), Universität Hamburg (DE), University of Koblenz and Landau (DE), University of Warwick (GB), Nationalparkverwaltung Niedersächsisches Wattenmeer (DE)
University of East Anglia, Deutsche Forschungsgemeinschaft, Stifterverband, Natural Environment Research Council
Clean water and sanitation
Openalex Percentile: Top 11%
Coastal wetland ecosystem dynamics
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