Microbacterium wangyouchuni sp. nov. and Microbacterium zouquanmingi sp. nov., isolated from soil in Mongolian marmot (Marmota sibirica) burrows

Four Gram-stain-positive, aerobic, non-motile and rod-shaped bacterial strains, designated A82 T , A588, A196 T and A204, were isolated from soil samples collected from Marmota sibirica burrows in Hulun Buir, Nei Mongol Autonomous Region, China. All four strains grew at 4–30 °C, pH 6.0–10.0 and 0–6.5% (wt/v) NaCl, and they were positive for oxidase and catalase activities. Phylogenetic analysis of 16S rRNA gene sequences indicated that the four strains belonged to two species within the genus Microbacterium . Strains A82 T and A588 exhibited the highest sequence similarity to Microbacterium profundi Shh49 T (98.83%) and Microbacterium murale 1 Gi-001 T (98.67%). Strains A196 T and A204 were most closely related to Microbacterium aerolatum NBRC 103071 T (99.10%) and Microbacterium shaanxiense CCNWSP60 T (98.63%). Comparing the four isolates with their reference strains showed that average nucleotide identity and digital DNA–DNA hybridization values were below the accepted species-delineation benchmarks of 95–96 and 70%, respectively. For the type strains A82 T and A196 T , the DNA G+C content was 64.7 and 65.4 mol%, respectively. Chemotaxonomic analysis revealed that both type strains possessed MK-13 as the sole respiratory quinone. Additionally, diphosphatidylglycerol, phosphatidylglycerol and unidentified glycolipids were the major polar lipids. Furthermore, anteiso -C 15 : 0 was identified as the major fatty acid, and the diamino acid in the cell-wall peptidoglycan contained alanine, glutamic acid, glycine, aspartic acid and ornithine. Therefore, strains A82 T /A588 and A196 T /A204 represent two novel species within the genus Microbacterium . Microbacterium wangyouchuni sp. nov. (A82 T /A588, type strain A82 T =GDMCC 1.5865 T =JCM 38342 T ) and Microbacterium zouquanmingi sp. nov. (A196 T /A204, type strain A196 T =GDMCC 1.6024 T =JCM 38357 T ) are proposed.

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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2026-09-15
DOI
https://doi.org/10.1099/ijsem.0.007283
Primary Topic
Genomics and Phylogenetic Studies
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article
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article

Microbacterium wangyouchuni sp. nov. and Microbacterium zouquanmingi sp. nov., isolated from soil in Mongolian marmot (Marmota sibirica) burrows

Jianguo Xu, Hongyu Yang, Ji Pu, Qun Xiao et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
article

Microbacterium wangyouchuni sp. nov. and Microbacterium zouquanmingi sp. nov., isolated from soil in Mongolian marmot (Marmota sibirica) burrows

Jianguo Xu, Hongyu Yang, Ji Pu, Qun Xiao, Wenbo Luo, Han Zheng, Jing Yang, Hao Zhou
article en

Abstract

Four Gram-stain-positive, aerobic, non-motile and rod-shaped bacterial strains, designated A82 T , A588, A196 T and A204, were isolated from soil samples collected from Marmota sibirica burrows in Hulun Buir, Nei Mongol Autonomous Region, China. All four strains grew at 4–30 °C, pH 6.0–10.0 and 0–6.5% (wt/v) NaCl, and they were positive for oxidase and catalase activities. Phylogenetic analysis of 16S rRNA gene sequences indicated that the four strains belonged to two species within the genus Microbacterium . Strains A82 T and A588 exhibited the highest sequence similarity to Microbacterium profundi Shh49 T (98.83%) and Microbacterium murale 1 Gi-001 T (98.67%). Strains A196 T and A204 were most closely related to Microbacterium aerolatum NBRC 103071 T (99.10%) and Microbacterium shaanxiense CCNWSP60 T (98.63%). Comparing the four isolates with their reference strains showed that average nucleotide identity and digital DNA–DNA hybridization values were below the accepted species-delineation benchmarks of 95–96 and 70%, respectively. For the type strains A82 T and A196 T , the DNA G+C content was 64.7 and 65.4 mol%, respectively. Chemotaxonomic analysis revealed that both type strains possessed MK-13 as the sole respiratory quinone. Additionally, diphosphatidylglycerol, phosphatidylglycerol and unidentified glycolipids were the major polar lipids. Furthermore, anteiso -C 15 : 0 was identified as the major fatty acid, and the diamino acid in the cell-wall peptidoglycan contained alanine, glutamic acid, glycine, aspartic acid and ornithine. Therefore, strains A82 T /A588 and A196 T /A204 represent two novel species within the genus Microbacterium . Microbacterium wangyouchuni sp. nov. (A82 T /A588, type strain A82 T =GDMCC 1.5865 T =JCM 38342 T ) and Microbacterium zouquanmingi sp. nov. (A196 T /A204, type strain A196 T =GDMCC 1.6024 T =JCM 38357 T ) are proposed.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 76(9)
National Institute for Communicable Disease Control and Prevention (CN), Nanjing Medical University (CN)
Life in Land
Openalex Percentile: Top 18%
Genomics and Phylogenetic Studies
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