Electronic structure, DNA-binding, and biological activity correlations in transition metal complexes of a tetradentate Schiff base: experimental and computational studies

A novel tetradentate Schiff base ligand (L), synthesized by the condensation of 2,6-diaminopyridine and 3,5-dichlorosalicylaldehyde, and its Cu(II), Ni(II), Co(II), Zn(II), and VO(IV) complexes were prepared and characterized by elemental analysis, FT-IR, UV-Vis, NMR, ESI-mass, magnetic susceptibility, thermal, and EPR studies. Spectroscopic evidence indicates coordination of the ligand through an N2O2 donor set. Based on the available spectroscopic, magnetic, and analytical data, the Cu(II), Ni(II), and Co(II) complexes are proposed to adopt predominantly square-planar geometries, while the Zn(II) and VO(IV) complexes are proposed to possess distorted tetrahedral and square-pyramidal geometries, respectively. DNA-binding interactions with calf thymus DNA were investigated using UV-Vis absorption, viscosity, and electrochemical techniques. The observed hypochromism, minor bathochromic shifts, and viscosity changes suggest a predominantly intercalative binding mode, with intrinsic binding constants (Kb) ranging from 3.59 × 104 to 6.43 × 104 M−1; the Cu(II) complex exhibited the highest affinity. Electrochemical studies further supported complex-DNA interactions. Density functional theory and molecular electrostatic potential analyses revealed enhanced electronic stabilization, with the Cu(II) and VO(IV) complexes exhibiting the smallest HOMO-LUMO energy gaps. These findings are consistent with their stronger DNA-binding affinity and higher biological activity. Molecular docking provided supportive evidence for favorable biomolecular interactions, particularly for the Cu(II) complex. Metal coordination enhanced the antibacterial, antioxidant, and anti-inflammatory activities compared with the free ligand, with the Cu(II) and VO(IV) complexes showing the most promising overall performance. The results demonstrate correlations between electronic structure, DNA-binding behavior, and biological activity in this class of transition metal complexes.

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Journal
Journal of Biomolecular Structure and Dynamics
Published
2026-09-16
DOI
https://doi.org/10.1080/07391102.2026.2728067
Primary Topic
Metal complexes synthesis and properties
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article
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article

Electronic structure, DNA-binding, and biological activity correlations in transition metal complexes of a tetradentate Schiff base: experimental and computational studies

Natarajan Raman, Karuppiah Nagaraj, Porkodi Jeyaraman, Samuel Michael et al.
Journal of Biomolecular Structure and Dynamics
Metal complexes synthesis and properties
article

Electronic structure, DNA-binding, and biological activity correlations in transition metal complexes of a tetradentate Schiff base: experimental and computational studies

Natarajan Raman, Karuppiah Nagaraj, Porkodi Jeyaraman, Samuel Michael, Lavanya Gnanamani, Silambarasan Tamilselvan
article en

Abstract

A novel tetradentate Schiff base ligand (L), synthesized by the condensation of 2,6-diaminopyridine and 3,5-dichlorosalicylaldehyde, and its Cu(II), Ni(II), Co(II), Zn(II), and VO(IV) complexes were prepared and characterized by elemental analysis, FT-IR, UV-Vis, NMR, ESI-mass, magnetic susceptibility, thermal, and EPR studies. Spectroscopic evidence indicates coordination of the ligand through an N2O2 donor set. Based on the available spectroscopic, magnetic, and analytical data, the Cu(II), Ni(II), and Co(II) complexes are proposed to adopt predominantly square-planar geometries, while the Zn(II) and VO(IV) complexes are proposed to possess distorted tetrahedral and square-pyramidal geometries, respectively. DNA-binding interactions with calf thymus DNA were investigated using UV-Vis absorption, viscosity, and electrochemical techniques. The observed hypochromism, minor bathochromic shifts, and viscosity changes suggest a predominantly intercalative binding mode, with intrinsic binding constants (Kb) ranging from 3.59 × 104 to 6.43 × 104 M−1; the Cu(II) complex exhibited the highest affinity. Electrochemical studies further supported complex-DNA interactions. Density functional theory and molecular electrostatic potential analyses revealed enhanced electronic stabilization, with the Cu(II) and VO(IV) complexes exhibiting the smallest HOMO-LUMO energy gaps. These findings are consistent with their stronger DNA-binding affinity and higher biological activity. Molecular docking provided supportive evidence for favorable biomolecular interactions, particularly for the Cu(II) complex. Metal coordination enhanced the antibacterial, antioxidant, and anti-inflammatory activities compared with the free ligand, with the Cu(II) and VO(IV) complexes showing the most promising overall performance. The results demonstrate correlations between electronic structure, DNA-binding behavior, and biological activity in this class of transition metal complexes.

Journal of Biomolecular Structure and Dynamics
New York City Fire Department (US), Government Ayurved College, Nanded (IN), Saveetha University (IN)
Openalex Percentile: Top 14%
Metal complexes synthesis and properties
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