Protocol for robust gene knockout and reliable validation in human cell lines using quad-guide RNA vectors

CRISPR-Cas9 is a powerful tool for editing genomic loci, however achieving high knockout efficiency at certain targets remains challenging. Here, we present a protocol for gene knockout using an all-in-one, quad-guide RNA-expressing vector. We describe steps for plasmid construction, virus preparation, transduction, and subsequent gene editing and functional validation within DLD-1 colorectal adenocarcinoma cells. This strategy provides an efficient workflow for gene knockout that is rapidly confirmed through PCR amplification of mRNA derived from the targeted gene loci.

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Publication Details

Journal
STAR Protocols
Published
2026-09-16
DOI
https://doi.org/10.1016/j.xpro.2026.104837
Primary Topic
RNA Interference and Gene Delivery
Type
article
Field-Weighted Citation Impact
0.00
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article

Protocol for robust gene knockout and reliable validation in human cell lines using quad-guide RNA vectors

Li-Chuan Chan, Michael Tobin, Jie Dai, Weiwei Guo
STAR Protocols
RNA Interference and Gene Delivery
article

Protocol for robust gene knockout and reliable validation in human cell lines using quad-guide RNA vectors

Li-Chuan Chan, Michael Tobin, Jie Dai, Weiwei Guo
article en

Abstract

CRISPR-Cas9 is a powerful tool for editing genomic loci, however achieving high knockout efficiency at certain targets remains challenging. Here, we present a protocol for gene knockout using an all-in-one, quad-guide RNA-expressing vector. We describe steps for plasmid construction, virus preparation, transduction, and subsequent gene editing and functional validation within DLD-1 colorectal adenocarcinoma cells. This strategy provides an efficient workflow for gene knockout that is rapidly confirmed through PCR amplification of mRNA derived from the targeted gene loci.

STAR ProtocolsVol. 7(4)
Boehringer Ingelheim (Brazil) (BR), Boehringer Ingelheim (France) (FR)
Openalex Percentile: Top 19%
RNA Interference and Gene Delivery
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