Microalgae Detection in Ship Ballast Water Based on YOLOv8 for Small-Object Detection

Conventional manual microscopic examination for ship ballast-water microalgae detection suffers from cumbersome classification procedures, subjective viability assessment, and low counting efficiency, making it difficult to accomplish multi-task detection simultaneously. To address these issues, this study takes Tetraselmis chui and Phaeodactylum tricornutum as research objects and constructs a trinity detection model integrating species classification, viability discrimination, and automatic counting based on the YOLOv8m network, combining the color and morphological features of neutral red vital staining. A four-class microalgae annotated dataset was established, and the model was trained with an input resolution of 800 × 800 pixels. The optimal confidence threshold (0.383) was determined on the validation set by maximizing the F1-score and then applied to test-set evaluation. The experimental results demonstrate that on 156 independent test-set images, the proposed model achieves an average precision of 95.9% and [email protected] of 96% across the four microalgae classes, with the highest precision of 97.3% for live Phaeodactylum tricornutum. Under the optimal confidence threshold, the average counting accuracy on the test set reaches 92.3%. Visualization tests confirm that the model can simultaneously accomplish species identification, viability determination, and cell counting in a single inference, providing a technical reference and algorithmic support for intelligent ballast-water microalgae monitoring.

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Publication Details

Journal
Water
Published
2026-09-16
DOI
https://doi.org/10.3390/w18182310
Primary Topic
Marine Ecology and Invasive Species
Type
article
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Microalgae Detection in Ship Ballast Water Based on YOLOv8 for Small-Object Detection

Zhiwei Ma, Jumei Zhou, Kunze Li
Water
Marine Ecology and Invasive Species
article

Microalgae Detection in Ship Ballast Water Based on YOLOv8 for Small-Object Detection

Zhiwei Ma, Jumei Zhou, Kunze Li
article en

Abstract

Conventional manual microscopic examination for ship ballast-water microalgae detection suffers from cumbersome classification procedures, subjective viability assessment, and low counting efficiency, making it difficult to accomplish multi-task detection simultaneously. To address these issues, this study takes Tetraselmis chui and Phaeodactylum tricornutum as research objects and constructs a trinity detection model integrating species classification, viability discrimination, and automatic counting based on the YOLOv8m network, combining the color and morphological features of neutral red vital staining. A four-class microalgae annotated dataset was established, and the model was trained with an input resolution of 800 × 800 pixels. The optimal confidence threshold (0.383) was determined on the validation set by maximizing the F1-score and then applied to test-set evaluation. The experimental results demonstrate that on 156 independent test-set images, the proposed model achieves an average precision of 95.9% and [email protected] of 96% across the four microalgae classes, with the highest precision of 97.3% for live Phaeodactylum tricornutum. Under the optimal confidence threshold, the average counting accuracy on the test set reaches 92.3%. Visualization tests confirm that the model can simultaneously accomplish species identification, viability determination, and cell counting in a single inference, providing a technical reference and algorithmic support for intelligent ballast-water microalgae monitoring.

WaterVol. 18(18)
Ningbo University (CN)
Peace, Justice and strong institutions
Openalex Percentile: Top 14%
Marine Ecology and Invasive Species
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Microalgae Detection in Ship Ballast Water Based on YOLOv8 for Small-Object Detection — Zhiwei Ma, Jumei Zhou, et al. · Water (2026) | TGRS Research Map | TGRS