Closing the Empirical Loop: Autonomous AI Agents Conduct End‐to‐end Research With Human Participants

Artificial intelligence systems are transforming scientific discovery by accelerating specific research tasks, from protein structure prediction to materials design, yet remain confined to narrow domains requiring substantial human oversight. Exponential growth of scientific literature and increasing domain specialization constrain researchers' capacity to synthesize knowledge across disciplines and develop unifying theories, motivating exploration of general-purpose AI systems for science. Here we show that a domain-agnostic, agentic AI Scientist system can independently navigate the scientific workflow -from hypothesis generation through data collection to manuscript preparation. The system autonomously designed and executed three psychological studies on visual working memory, mental rotation, and imagery vividness, executed online data collection with 288 participants, developed analysis pipelines through 8h+ continuous coding sessions, and produced completed manuscripts. The results demonstrate the capability of AI scientific discovery pipelines to conduct research with theoretical reasoning and methodological rigor comparable to experienced researchers, though with limitations in conceptual nuance and theoretical interpretation. This is a step toward embodied AI that can test hypotheses through real-world experiments, accelerating discovery by autonomously exploring regions of scientific space that human cognitive and resource constraints might otherwise leave unexplored. It raises important questions about the nature of scientific understanding and attribution of scientific credit.

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Publication Details

Journal
Advanced Science
Published
2026-09-14
DOI
https://doi.org/10.1002/advs.76675
Primary Topic
Cell Image Analysis Techniques
Type
article
Field-Weighted Citation Impact
0.00
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article

Closing the Empirical Loop: Autonomous AI Agents Conduct End‐to‐end Research With Human Participants

Jason B. Mattingley, Jason M. Tangen, Reuben Rideaux, Shane E. Ehrhardt et al.
Advanced Science
Cell Image Analysis Techniques
article

Closing the Empirical Loop: Autonomous AI Agents Conduct End‐to‐end Research With Human Participants

Jason B. Mattingley, Jason M. Tangen, Reuben Rideaux, Shane E. Ehrhardt, Amaya Fox, Gabrielle Wehr, David R. Lightfoot
article en

Abstract

Artificial intelligence systems are transforming scientific discovery by accelerating specific research tasks, from protein structure prediction to materials design, yet remain confined to narrow domains requiring substantial human oversight. Exponential growth of scientific literature and increasing domain specialization constrain researchers' capacity to synthesize knowledge across disciplines and develop unifying theories, motivating exploration of general-purpose AI systems for science. Here we show that a domain-agnostic, agentic AI Scientist system can independently navigate the scientific workflow -from hypothesis generation through data collection to manuscript preparation. The system autonomously designed and executed three psychological studies on visual working memory, mental rotation, and imagery vividness, executed online data collection with 288 participants, developed analysis pipelines through 8h+ continuous coding sessions, and produced completed manuscripts. The results demonstrate the capability of AI scientific discovery pipelines to conduct research with theoretical reasoning and methodological rigor comparable to experienced researchers, though with limitations in conceptual nuance and theoretical interpretation. This is a step toward embodied AI that can test hypotheses through real-world experiments, accelerating discovery by autonomously exploring regions of scientific space that human cognitive and resource constraints might otherwise leave unexplored. It raises important questions about the nature of scientific understanding and attribution of scientific credit.

Advanced Science
Canadian Institute for Advanced Research (CA), The University of Sydney (AU), The University of Queensland (AU), Exploreum Science Center (US)
Openalex Percentile: Top 12%
Cell Image Analysis Techniques
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