Differentially private and explainable machine learning for vasovagal syncope detection: a feasibility study of homomorphic encryption for secure inference

Vasovagal syncope (VVS) is a common cause of transient loss of consciousness and presents diagnostic challenges. The head-up tilt test (HUTT) is the standard method for diagnosis; however, existing approaches often show limited sensitivity, and adoption of Artificial Intelligence (AI)-based tools is constrained by concerns related to privacy and interpretability. This study investigates a proof-of-concept privacy-preserving framework for VVS detection using HUTT-derived physiological signals. A dataset of 137 participants (54 VVS-positive, 83 VVS-negative) was analysed. 54 features were extracted from electrocardiogram (ECG) and blood pressure signals recorded during the HUTT protocol. Logistic regression was trained using differentially private stochastic gradient descent (DP-SGD) with per-example gradient clipping and Gaussian noise injection. For secure inference, fully homomorphic encryption (FHE) using the Cheon–Kim–Kim–Song (CKKS) scheme (TenSEAL) was applied, with a degree-3 polynomial approximation of the sigmoid function for encrypted prediction. Model interpretability was evaluated using LIME and SHAP analyses. A stratified 5-fold cross-validation framework with within-fold pre-processing was implemented to prevent data leakage. Baseline models included logistic regression, random forest, and artificial neural networks (ANN). The DP-SGD model with feature importance selection achieved an accuracy of 0.833 ± 0.035 and an area under the receiver operating characteristic curve (ROC-AUC) of 0.888 ± 0.019 under a formal privacy budget ( ε ≈ 16.5, δ = 10⁻ 5 ). In contrast, FHE-based inference (applied only at the prediction stage) demonstrated substantially reduced performance (ROC-AUC ≈ 0.53) due to polynomial approximation constraints within the CKKS encrypted inference pipeline. Interpretability analyses consistently identified tilt-phase haemodynamic features (SBP_T, DBP_T) and autonomic indices (LFHF_RRI_T, LFHF_SBP_T) as key predictors. This proof-of-concept study demonstrates that differential privacy can be integrated into a VVS detection pipeline with minimal utility loss, while FHE-based inference remains constrained by approximation error. All reported performance metrics represent internal, cross-validated estimates from a single-centre dataset and should not be interpreted as evidence of generalizable clinical performance. Findings are limited by the small single-centre dataset and absence of external validation, and omission of subgroup analysis due to data minimization and sample size constraints. Future work should include multi-centre evaluation and optimized homomorphic inference architectures.

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Publication Details

Journal
BioMedical Engineering OnLine
Published
2026-09-12
DOI
https://doi.org/10.1186/s12938-026-01626-2
Primary Topic
Cryptography and Data Security
Type
article
Field-Weighted Citation Impact
0.00

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article

Differentially private and explainable machine learning for vasovagal syncope detection: a feasibility study of homomorphic encryption for secure inference

Ban-Hoe Kwan, Maw Pin Tan, Choon‐Hian Goh, Mahbuba Ferdowsi
BioMedical Engineering OnLine
Cryptography and Data Security
article

Differentially private and explainable machine learning for vasovagal syncope detection: a feasibility study of homomorphic encryption for secure inference

Ban-Hoe Kwan, Maw Pin Tan, Choon‐Hian Goh, Mahbuba Ferdowsi
article en

Abstract

Vasovagal syncope (VVS) is a common cause of transient loss of consciousness and presents diagnostic challenges. The head-up tilt test (HUTT) is the standard method for diagnosis; however, existing approaches often show limited sensitivity, and adoption of Artificial Intelligence (AI)-based tools is constrained by concerns related to privacy and interpretability. This study investigates a proof-of-concept privacy-preserving framework for VVS detection using HUTT-derived physiological signals. A dataset of 137 participants (54 VVS-positive, 83 VVS-negative) was analysed. 54 features were extracted from electrocardiogram (ECG) and blood pressure signals recorded during the HUTT protocol. Logistic regression was trained using differentially private stochastic gradient descent (DP-SGD) with per-example gradient clipping and Gaussian noise injection. For secure inference, fully homomorphic encryption (FHE) using the Cheon–Kim–Kim–Song (CKKS) scheme (TenSEAL) was applied, with a degree-3 polynomial approximation of the sigmoid function for encrypted prediction. Model interpretability was evaluated using LIME and SHAP analyses. A stratified 5-fold cross-validation framework with within-fold pre-processing was implemented to prevent data leakage. Baseline models included logistic regression, random forest, and artificial neural networks (ANN). The DP-SGD model with feature importance selection achieved an accuracy of 0.833 ± 0.035 and an area under the receiver operating characteristic curve (ROC-AUC) of 0.888 ± 0.019 under a formal privacy budget ( ε ≈ 16.5, δ = 10⁻ 5 ). In contrast, FHE-based inference (applied only at the prediction stage) demonstrated substantially reduced performance (ROC-AUC ≈ 0.53) due to polynomial approximation constraints within the CKKS encrypted inference pipeline. Interpretability analyses consistently identified tilt-phase haemodynamic features (SBP_T, DBP_T) and autonomic indices (LFHF_RRI_T, LFHF_SBP_T) as key predictors. This proof-of-concept study demonstrates that differential privacy can be integrated into a VVS detection pipeline with minimal utility loss, while FHE-based inference remains constrained by approximation error. All reported performance metrics represent internal, cross-validated estimates from a single-centre dataset and should not be interpreted as evidence of generalizable clinical performance. Findings are limited by the small single-centre dataset and absence of external validation, and omission of subgroup analysis due to data minimization and sample size constraints. Future work should include multi-centre evaluation and optimized homomorphic inference architectures.

BioMedical Engineering OnLine
University of Canberra (AU), University of Malaya (MY), Sunway University (MY), Universiti Tunku Abdul Rahman (MY)
Universiti Tunku Abdul Rahman
Openalex Percentile: Top 8%
Cryptography and Data Security
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