Spatial-temporal distribution characteristics of haemorrhagic fever with renal syndrome (HFRS) in 31 provinces and municipalities of P.R. China and multi-factorial prediction of incidence

OBJECTIVE: To integrate multi-source spatiotemporal data and construct an HFRS incidence prediction model using XGBoost with SHAP, exploring factors associated with HFRS incidence in China. METHODS: Collected HFRS case data from 31 provinces in China (2005-2020) and multi-source data on climate, land use, and population. Used MaxEnt to analyze rodent distribution and key environmental variables. Constructed an XGBoost model integrating climate, land use, host, and socio-economic features, with SHAP values assessing feature contributions. Dataset divided into training (70%), validation (15%), and test (15%) sets, with higher weights for high-incidence provinces. RESULTS: The reported HFRS cases in mainland China decreased from 2005 to 2020 but showed seasonal peaks. Cases were mainly among adults aged 20-60 years. The distribution of virus-carrying rodents was mainly affected by minimum temperature of the coldest month and elevation. After removing temporal features, land-use types (forest, cropland, shrub) showed greater relative importance than climate variables. CONCLUSION: Forest, shrub, and cropland may affect disease transmission via host distribution and food availability. Climate factors act indirectly on HFRS risk. Temporal features remain critical for incidence prediction, while land use and rodent habitats are key exogenous drivers. These findings support targeted public health strategies.

Authors

Institutions

Publication Details

Journal
PLoS neglected tropical diseases
Published
2026-09-11
DOI
https://doi.org/10.1371/journal.pntd.0014619
Primary Topic
Viral Infections and Vectors
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Spatial-temporal distribution characteristics of haemorrhagic fever with renal syndrome (HFRS) in 31 provinces and municipalities of P.R. China and multi-factorial prediction of incidence

Weilong Tan, Hengduan Zhang, Jiaojiao Qian, Huan Huang et al.
PLoS neglected tropical diseases
Viral Infections and Vectors
article

Spatial-temporal distribution characteristics of haemorrhagic fever with renal syndrome (HFRS) in 31 provinces and municipalities of P.R. China and multi-factorial prediction of incidence

Weilong Tan, Hengduan Zhang, Jiaojiao Qian, Huan Huang, Xin Zhao, Qiyuan Kuai, Fanjin Meng, Weibo Ma, Huajing Zhu, Yifan Wu
article en

Abstract

OBJECTIVE: To integrate multi-source spatiotemporal data and construct an HFRS incidence prediction model using XGBoost with SHAP, exploring factors associated with HFRS incidence in China. METHODS: Collected HFRS case data from 31 provinces in China (2005-2020) and multi-source data on climate, land use, and population. Used MaxEnt to analyze rodent distribution and key environmental variables. Constructed an XGBoost model integrating climate, land use, host, and socio-economic features, with SHAP values assessing feature contributions. Dataset divided into training (70%), validation (15%), and test (15%) sets, with higher weights for high-incidence provinces. RESULTS: The reported HFRS cases in mainland China decreased from 2005 to 2020 but showed seasonal peaks. Cases were mainly among adults aged 20-60 years. The distribution of virus-carrying rodents was mainly affected by minimum temperature of the coldest month and elevation. After removing temporal features, land-use types (forest, cropland, shrub) showed greater relative importance than climate variables. CONCLUSION: Forest, shrub, and cropland may affect disease transmission via host distribution and food availability. Climate factors act indirectly on HFRS risk. Temporal features remain critical for incidence prediction, while land use and rodent habitats are key exogenous drivers. These findings support targeted public health strategies.

PLoS neglected tropical diseasesVol. 20(9)
Nanjing General Hospital of Nanjing Military Command (CN), Institute of Microbiology (BY), Bioengineering Center (RU), Nanjing Medical University (CN)
China Postdoctoral Science Foundation
Climate action
Openalex Percentile: Top 11%
Viral Infections and Vectors
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.