Bridging the accuracy-speed divide in reactive molecular dynamics with QuantaMind MD

Simulating chemical reactivity remains a central challenge in molecular dynamics, historically constrained by the trade-off between ab initio accuracy and classical efficiency. We present QuantaMind, a machine learning force field (MLFF) framework that attains density functional theory (DFT)-level accuracy, enabling fully reactive simulations of complex molecular systems. QuantaMind achieves exceptional numerical stability over tens-of-nanosecond trajectories, maintaining accuracy throughout long-time reactive dynamics. It reproduces spontaneous bond formation and cleavage in key chemical processes-including proton transfer, acid-base neutralization, and phosphate buffering-and captures biologically essential phenomena such as histidine titration under constant pH. As a demonstration of the framework's applicability to enzyme catalysis, QuantaMind recapitulates the complete catalytic cycle of the PETase-catalyzed hydrolysis reaction. By uniting quantum-level accuracy with computational efficiency comparable to state-of-the-art MLFFs, QuantaMind establishes a paradigm for long-timescale, fully reactive molecular simulation, opening avenues for rational catalyst design, reactive materials discovery, and predictive modeling of biochemical function.

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Publication Details

Journal
Science Advances
Published
2026-09-11
DOI
https://doi.org/10.1126/sciadv.aeg3595
Primary Topic
Machine Learning in Materials Science
Type
article
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article

Bridging the accuracy-speed divide in reactive molecular dynamics with QuantaMind MD

Song Xia, Jinbo Xu, Deqiang Zhang, Shang Xu
Science Advances
Machine Learning in Materials Science
article

Bridging the accuracy-speed divide in reactive molecular dynamics with QuantaMind MD

Song Xia, Jinbo Xu, Deqiang Zhang, Shang Xu
article en

Abstract

Simulating chemical reactivity remains a central challenge in molecular dynamics, historically constrained by the trade-off between ab initio accuracy and classical efficiency. We present QuantaMind, a machine learning force field (MLFF) framework that attains density functional theory (DFT)-level accuracy, enabling fully reactive simulations of complex molecular systems. QuantaMind achieves exceptional numerical stability over tens-of-nanosecond trajectories, maintaining accuracy throughout long-time reactive dynamics. It reproduces spontaneous bond formation and cleavage in key chemical processes-including proton transfer, acid-base neutralization, and phosphate buffering-and captures biologically essential phenomena such as histidine titration under constant pH. As a demonstration of the framework's applicability to enzyme catalysis, QuantaMind recapitulates the complete catalytic cycle of the PETase-catalyzed hydrolysis reaction. By uniting quantum-level accuracy with computational efficiency comparable to state-of-the-art MLFFs, QuantaMind establishes a paradigm for long-timescale, fully reactive molecular simulation, opening avenues for rational catalyst design, reactive materials discovery, and predictive modeling of biochemical function.

Science AdvancesVol. 12(37)
Renmin University of China (CN)
Openalex Percentile: Top 24%
Machine Learning in Materials Science
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