Density peaks clustering with spatiotemporal nearest neighbors

Density peaks clustering (DPC) encounters three limitations when applied to spatiotemporal data. Its local density estimate has limited capacity to distinguish samples drawn from regions with different densities, which can bias cluster center identification. Its distance measure emphasizes spatial information and may fail to separate clusters that are spatially close but temporally distinct. Its assignment strategy also lacks an explicit mechanism for anomalous samples, thereby reducing clustering accuracy. To address these limitations, a method termed density peaks clustering with spatiotemporal nearest neighbors (STN-DPC) is proposed. Separate sets of spatial and temporal K-nearest neighbors are constructed, and natural nearest neighbors are identified through mutual inclusion. Spatial and temporal base densities are then combined, while neighborhood support is weighted according to the number of natural nearest neighbors. This design improves density discrimination across heterogeneous local structures. Next, spatial and temporal average nearest neighbor distances are derived from nearest neighbor order. They correct distance shifts caused by scale differences between dimensions and limit the dominance of either dimension during cluster discrimination. Finally, a joint score is formed from the medians and median absolute deviations of local density and relative distance. Anomalous samples are identified from this score and removed from the clustering result. Experiments on the four synthetic datasets show that STN-DPC performs well in terms of AMI, ARI, and FMI, and its application to the earthquake catalogue identifies three sequences with spatiotemporal associations.

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Publication Details

Journal
International Journal of Software Engineering and Knowledge Engineering
Published
2026-09-10
DOI
https://doi.org/10.1142/s0218194026500816
Primary Topic
Advanced Clustering Algorithms Research
Type
article
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article

Density peaks clustering with spatiotemporal nearest neighbors

S. Kang, Jia Zhao, Shenyu Qiu, Jingwei Chen et al.
International Journal of Software Engineering and Knowledge Engineering
Advanced Clustering Algorithms Research
article

Density peaks clustering with spatiotemporal nearest neighbors

S. Kang, Jia Zhao, Shenyu Qiu, Jingwei Chen, Haihua Xie, Sijun Hu, Hao Cao
article en

Abstract

Density peaks clustering (DPC) encounters three limitations when applied to spatiotemporal data. Its local density estimate has limited capacity to distinguish samples drawn from regions with different densities, which can bias cluster center identification. Its distance measure emphasizes spatial information and may fail to separate clusters that are spatially close but temporally distinct. Its assignment strategy also lacks an explicit mechanism for anomalous samples, thereby reducing clustering accuracy. To address these limitations, a method termed density peaks clustering with spatiotemporal nearest neighbors (STN-DPC) is proposed. Separate sets of spatial and temporal K-nearest neighbors are constructed, and natural nearest neighbors are identified through mutual inclusion. Spatial and temporal base densities are then combined, while neighborhood support is weighted according to the number of natural nearest neighbors. This design improves density discrimination across heterogeneous local structures. Next, spatial and temporal average nearest neighbor distances are derived from nearest neighbor order. They correct distance shifts caused by scale differences between dimensions and limit the dominance of either dimension during cluster discrimination. Finally, a joint score is formed from the medians and median absolute deviations of local density and relative distance. Anomalous samples are identified from this score and removed from the clustering result. Experiments on the four synthetic datasets show that STN-DPC performs well in terms of AMI, ARI, and FMI, and its application to the earthquake catalogue identifies three sequences with spatiotemporal associations.

International Journal of Software Engineering and Knowledge Engineering
Twitter (United States) (US)
Reduced inequalities
Openalex Percentile: Top 8%
Advanced Clustering Algorithms Research
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Density peaks clustering with spatiotemporal nearest neighbors — S. Kang, Jia Zhao, et al. · International Journal of Software Engineering and Knowledge Engineering (2026) | TGRS Research Map | TGRS