ERGA-BGE reference genome: Homalothecium mandonii - IUCN vulnerable Bryophyte species endemic to Macaronesia

The reference genome of Homalothecium mandonii provides an important resource for studying the genetic basis of adaptation and conservation of Macaronesian endemic bryophytes. The entirety of the genome sequence was assembled into 10 contiguous chromosomal pseudomolecules, along with one mitochondrial genome and one chloroplast. This chromosome-level assembly encompasses 416.4 Mb, composed of 45 contigs and 20 scaffolds, with contig and scaffold N50 values 23.3 Mb and 38.8 Mb, respectively.

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Publication Details

Journal
Open Research Europe
Published
2026-09-10
DOI
https://doi.org/10.12688/openreseurope.24602.1
Primary Topic
Bryophyte Studies and Records
Type
article
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article

ERGA-BGE reference genome: Homalothecium mandonii - IUCN vulnerable Bryophyte species endemic to Macaronesia

Chiara Bortoluzzi, Simone Duprat, Anabela Martins, Pedro H. Oliveira et al.
Open Research Europe
Bryophyte Studies and Records
article

ERGA-BGE reference genome: Homalothecium mandonii - IUCN vulnerable Bryophyte species endemic to Macaronesia

Chiara Bortoluzzi, Simone Duprat, Anabela Martins, Pedro H. Oliveira, Alice Moussy, Lola Demirdjian, Patrick Wincker, Jean-Marc Aury, Carlos Lobo, Susana Fontinha, Karine Labadie, Corinne Cruaud, Manuela Sim-Sim, Genoscope Sequencing Technical Team
article en

Abstract

The reference genome of Homalothecium mandonii provides an important resource for studying the genetic basis of adaptation and conservation of Macaronesian endemic bryophytes. The entirety of the genome sequence was assembled into 10 contiguous chromosomal pseudomolecules, along with one mitochondrial genome and one chloroplast. This chromosome-level assembly encompasses 416.4 Mb, composed of 45 contigs and 20 scaffolds, with contig and scaffold N50 values 23.3 Mb and 38.8 Mb, respectively.

Open Research EuropeVol. 6
SIB Swiss Institute of Bioinformatics (CH), Centre National de la Recherche Scientifique (FR), Commissariat à l'Énergie Atomique et aux Énergies Alternatives (FR), Université Paris-Saclay (FR), Sustainability Institute (ZA), Agencia Regional da Energia e Ambiente da Regiao Autonoma da Madeira (PT), Secretaria Regional do Ambiente e Recursos Naturais (PT), Genoscope (FR), National Archaeology Museum (PT), CEA Paris-Saclay (FR), Centro Interuniversitário de História das Ciências e da Tecnologia (PT), Universidade da Madeira (PT)
Life in Land
Openalex Percentile: Top 7%
Bryophyte Studies and Records
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ERGA-BGE reference genome: Homalothecium mandonii - IUCN vulnerable Bryophyte species endemic to Macaronesia — Chiara Bortoluzzi, Simone Duprat, et al. · Open Research Europe (2026) | TGRS Research Map | TGRS