PREDICT-GBM: A multicenter platform advancing personalized glioblastoma radiotherapy planning

Abstract Glioblastoma recurrence is largely driven by diffuse infiltration beyond radiologically visible margins, yet current radiotherapy guidelines rely on uniform margin expansions that ignore patient-specific biology and anatomy. While computational models promise to map this invisible growth and guide personalized planning, their clinical translation is hindered by a lack of standardized benchmarking and reproducible validation. To bridge this gap, we present PREDICT-GBM, an open-source platform integrating a curated, longitudinal, multi-center dataset of 243 patients with a standardized evaluation pipeline. We benchmark a novel U-Net-based recurrence prediction model against state-of-the-art biophysical and data-driven methods. Under iso-volumetric constraints, both biophysical and deep-learning approaches achieved modest but statistically significant gains in geometric coverage of future recurrence over guideline-based plans. On the combined cohort, our U-Net achieved the highest mean coverage of enhancing recurrence (79.37 ± 2.08%), surpassing guideline-based plans (paired Wilcoxon signed-rank test, Benjamini-Hochberg adjusted p = 2.9 × 10 −5 ). The biophysical model GliODIL reached 78.91 ± 2.08% ( p = 1.0 × 10 −3 ), validating the platform’s ability to compare diverse modeling paradigms. By providing a reproducible ecosystem for model training and validation, PREDICT-GBM addresses a major bottleneck toward personalized, computationally guided radiotherapy. The platform, models, and data are openly available at github.com/BrainLesion/PredictGBM .

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Publication Details

Journal
npj Digital Medicine
Published
2026-09-09
DOI
https://doi.org/10.1038/s41746-026-03194-0
Primary Topic
Glioma Diagnosis and Treatment
Type
article
Field-Weighted Citation Impact
0.00
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article

PREDICT-GBM: A multicenter platform advancing personalized glioblastoma radiotherapy planning

John Lowengrub, Santiago Cepeda, Ivan Ezhov, Benedikt Wiestler et al.
npj Digital Medicine
Glioma Diagnosis and Treatment
article

PREDICT-GBM: A multicenter platform advancing personalized glioblastoma radiotherapy planning

John Lowengrub, Santiago Cepeda, Ivan Ezhov, Benedikt Wiestler, Michał Balcerak, Lucas Zimmer, Jonas Weidner, Ray Zirui Zhang, Bjoern Menze, Florian Kofler, Mara Krupa
article en

Abstract

Abstract Glioblastoma recurrence is largely driven by diffuse infiltration beyond radiologically visible margins, yet current radiotherapy guidelines rely on uniform margin expansions that ignore patient-specific biology and anatomy. While computational models promise to map this invisible growth and guide personalized planning, their clinical translation is hindered by a lack of standardized benchmarking and reproducible validation. To bridge this gap, we present PREDICT-GBM, an open-source platform integrating a curated, longitudinal, multi-center dataset of 243 patients with a standardized evaluation pipeline. We benchmark a novel U-Net-based recurrence prediction model against state-of-the-art biophysical and data-driven methods. Under iso-volumetric constraints, both biophysical and deep-learning approaches achieved modest but statistically significant gains in geometric coverage of future recurrence over guideline-based plans. On the combined cohort, our U-Net achieved the highest mean coverage of enhancing recurrence (79.37 ± 2.08%), surpassing guideline-based plans (paired Wilcoxon signed-rank test, Benjamini-Hochberg adjusted p = 2.9 × 10 −5 ). The biophysical model GliODIL reached 78.91 ± 2.08% ( p = 1.0 × 10 −3 ), validating the platform’s ability to compare diverse modeling paradigms. By providing a reproducible ecosystem for model training and validation, PREDICT-GBM addresses a major bottleneck toward personalized, computationally guided radiotherapy. The platform, models, and data are openly available at github.com/BrainLesion/PredictGBM .

npj Digital MedicineVol. 9(1)
Worcester Polytechnic Institute (US), Universidad de Valladolid (ES), University of Zurich (CH), University of California, Irvine (US), Helmholtz Zentrum München (DE), Instituto de Biomedicina y Genética Molecular de Valladolid (ES), Hertie Institute for Clinical Brain Research (DE), Hospital Universitario Río Hortega (ES), Munich Center for Machine Learning, Technical University of Munich (DE), University of Tübingen (DE)
Life in Land
Openalex Percentile: Top 11%
Glioma Diagnosis and Treatment
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