Geometry-tuned inertial microfluidics for label-free enrichment of CTC-sized cells in serpentine microchannels

Circulating tumor cells (CTCs) are important biomarkers for metastatic progression, but their label-free enrichment from blood remains challenging because of their rarity, heterogeneity, and partial size overlap with hematologic cells. In this study, we present a serpentine inertial microfluidic platform for the label-free, outlet-specific enrichment of CTC-sized model cells. Serpentine microchannels with a fixed width of 350 μm, inner radius of 800 μm, and curvature angle of 280° were evaluated using numerical simulations, hemocytometer counting, flow cytometry, and confocal fluorescence imaging. HeLa cells were used as CTC-sized model cells, while Jurkat and K562 cells represented smaller hematologic background populations. The two candidate two-outlet devices were evaluated as complete configurations: a 73 μm-depth device incorporating a 90° terminal outlet branch and a 105 μm-depth device incorporating a 72° terminal outlet branch. Among the tested configurations, the 105 μm/72° device showed the strongest preferential partitioning of outlet-recovered HeLa cells toward the designated collection outlet. At the flowrate of 1000 μL/min, numerical simulations predicted that approximately 92% of the outlet-recovered HeLa cells would be directed to a certain outlet, whereas the corresponding experimental measurements yielded collection-outlet HeLa fractions of 92.0% and 97.5%. At the flowrate of 2000 μL/min, the experimental values showed a greater between-run variability, at 92.5% and 71.1%. Whole-blood experiments with spiked HeLa cells further demonstrated preferential HeLa-associated partitioning toward a certain outlet in a complex biological matrix. Because the channel depth and outlet angle were varied simultaneously, the observed improvement is interpreted as the combined effect of upstream Dean-inertial migration and downstream outlet-stream alignment rather than as an isolated depth effect.

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Publication Details

Journal
Micro and Nano Engineering
Published
2026-09-06
DOI
https://doi.org/10.1016/j.mne.2026.100396
Primary Topic
Microfluidic and Bio-sensing Technologies
Type
article
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article

Geometry-tuned inertial microfluidics for label-free enrichment of CTC-sized cells in serpentine microchannels

Ünal Akar, Özlem Kutlu, Sibel Çetinel, Morteza Ghorbani et al.
Micro and Nano Engineering
Microfluidic and Bio-sensing Technologies
article

Geometry-tuned inertial microfluidics for label-free enrichment of CTC-sized cells in serpentine microchannels

Ünal Akar, Özlem Kutlu, Sibel Çetinel, Morteza Ghorbani, Ali Koşar, Ezgi Kestek, Ayşegül Açıksarı, Ramazan Ceylan
article en

Abstract

Circulating tumor cells (CTCs) are important biomarkers for metastatic progression, but their label-free enrichment from blood remains challenging because of their rarity, heterogeneity, and partial size overlap with hematologic cells. In this study, we present a serpentine inertial microfluidic platform for the label-free, outlet-specific enrichment of CTC-sized model cells. Serpentine microchannels with a fixed width of 350 μm, inner radius of 800 μm, and curvature angle of 280° were evaluated using numerical simulations, hemocytometer counting, flow cytometry, and confocal fluorescence imaging. HeLa cells were used as CTC-sized model cells, while Jurkat and K562 cells represented smaller hematologic background populations. The two candidate two-outlet devices were evaluated as complete configurations: a 73 μm-depth device incorporating a 90° terminal outlet branch and a 105 μm-depth device incorporating a 72° terminal outlet branch. Among the tested configurations, the 105 μm/72° device showed the strongest preferential partitioning of outlet-recovered HeLa cells toward the designated collection outlet. At the flowrate of 1000 μL/min, numerical simulations predicted that approximately 92% of the outlet-recovered HeLa cells would be directed to a certain outlet, whereas the corresponding experimental measurements yielded collection-outlet HeLa fractions of 92.0% and 97.5%. At the flowrate of 2000 μL/min, the experimental values showed a greater between-run variability, at 92.5% and 71.1%. Whole-blood experiments with spiked HeLa cells further demonstrated preferential HeLa-associated partitioning toward a certain outlet in a complex biological matrix. Because the channel depth and outlet angle were varied simultaneously, the observed improvement is interpreted as the combined effect of upstream Dean-inertial migration and downstream outlet-stream alignment rather than as an isolated depth effect.

Micro and Nano EngineeringVol. 33
Sabancı Üniversitesi (TR), Kocaeli Üniversitesi (TR)
Openalex Percentile: Top 20%
Microfluidic and Bio-sensing Technologies
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