Complete genome sequences of three co-occurring Pseudomonas isolates from California Botanic Garden topsoil

ABSTRACT We report the complete genome sequences of three Pseudomonas isolates recovered from topsoil at the California Botanic Garden. Two isolates share ~99.4% average nucleotide identity, enabling investigation of intraspecies microvariation; the third represents a co-occurring distinct species, together capturing species- and strain-level genomic diversity within a natural soil community.

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Publication Details

Journal
Microbiology Resource Announcements
Published
2026-09-04
DOI
https://doi.org/10.1128/mra.00793-26
Primary Topic
Genomics and Phylogenetic Studies
Type
article
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article

Complete genome sequences of three co-occurring Pseudomonas isolates from California Botanic Garden topsoil

J. Cesar Ignacio‐Espinoza, Chun‐Yu Chen, Yan Yan, Rafael Escobar et al.
Microbiology Resource Announcements
Genomics and Phylogenetic Studies
article

Complete genome sequences of three co-occurring Pseudomonas isolates from California Botanic Garden topsoil

J. Cesar Ignacio‐Espinoza, Chun‐Yu Chen, Yan Yan, Rafael Escobar, Xiaokuan Wang
article en

Abstract

ABSTRACT We report the complete genome sequences of three Pseudomonas isolates recovered from topsoil at the California Botanic Garden. Two isolates share ~99.4% average nucleotide identity, enabling investigation of intraspecies microvariation; the third represents a co-occurring distinct species, together capturing species- and strain-level genomic diversity within a natural soil community.

Microbiology Resource Announcements
Claremont McKenna College (US), Harvey Mudd College (US), Keck Graduate Institute (US)
Life in Land
Openalex Percentile: Top 18%
Genomics and Phylogenetic Studies
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