Reconstruction of Ordered Prefix Languages from Coarsened Carry Traces

This paper develops an exact inverse theory for ordered carry traces on zero-prolongable prefix languages. It asks how much of an underlying legality language can be reconstructed when the reset depth between consecutive legal words is observed only through a possibly noninjective numerical decoder. The paper proves that every strict jump of the decoder reveals a complete ordered cylinder partition. Across all widths, the carry traces determine exactly the language’s -decimated ancestry system, where The complete ordered prefix tree is therefore universally reconstructible precisely when . Under gap-free branching, the traces also reconstruct the labelled language. A visibility graph associated with the decoder gives the exact finite observation horizon required for reconstruction: Matching lower bounds show that this horizon is optimal, even for binary gap-free languages. In the important first-jump case , one has , so traces through width recover the language through depth with no additional look-ahead. The paper also examines hidden state-dependent carry costs, explains why the depth-only assumption is substantive, and identifies uniform cross-state separation as a sufficient condition for extending part of the reconstruction theory.

Authors

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-08-27
DOI
https://doi.org/10.5281/zenodo.22124487
Primary Topic
DNA and Biological Computing
Type
preprint
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preprint

Reconstruction of Ordered Prefix Languages from Coarsened Carry Traces

Paul Higham
Zenodo (CERN European Organization for Nuclear Research)
DNA and Biological Computing
preprint

Reconstruction of Ordered Prefix Languages from Coarsened Carry Traces

Paul Higham
preprint en

Abstract

This paper develops an exact inverse theory for ordered carry traces on zero-prolongable prefix languages. It asks how much of an underlying legality language can be reconstructed when the reset depth between consecutive legal words is observed only through a possibly noninjective numerical decoder. The paper proves that every strict jump of the decoder reveals a complete ordered cylinder partition. Across all widths, the carry traces determine exactly the language’s -decimated ancestry system, where The complete ordered prefix tree is therefore universally reconstructible precisely when . Under gap-free branching, the traces also reconstruct the labelled language. A visibility graph associated with the decoder gives the exact finite observation horizon required for reconstruction: Matching lower bounds show that this horizon is optimal, even for binary gap-free languages. In the important first-jump case , one has , so traces through width recover the language through depth with no additional look-ahead. The paper also examines hidden state-dependent carry costs, explains why the depth-only assumption is substantive, and identifies uniform cross-state separation as a sufficient condition for extending part of the reconstruction theory.

Zenodo (CERN European Organization for Nuclear Research)
DNA and Biological Computing
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