Learning from Scarce Labels: Multi-View Echocardiography for Ejection Fraction Prediction
We present, to the best of our knowledge, the first publicly available resource for predicting left ventricular ejection fraction (EF) from parasternal long-axis (PLAX) echocardiography. Because no PLAX–EF datasets previously existed, our work focuses on an innovative data generation strategy to overcome this scarcity. By leveraging a time-based correlation between clinical notes and echocardiographic videos, combined with fine-tuning view classifiers and proxy labeling, we created a labeled dataset of over 25,000 PLAX videos. This enables us to train the first reproducible PLAX EF model, achieving a mean absolute error (MAE) of 6.86%. Given that apical four-chamber (A4C) methods, the clinical standard, report MAE values of 6%-7%, our results demonstrate that EF estimation from PLAX views is both feasible and clinically relevant. This surpasses the performance of existing methods and provides a clinically relevant solution for situations where apical views may not be feasible. Going further, we demonstrate that combining PLAX and A4C predictions via simple unweighted late fusion improves both single-view baselines to a 6.37% MAE, underscoring the value of multi-view integration. To promote continued research, we release the dataset labels, trained models, and runnable demos on GitHub, Hugging Face, and Google Colab: https://github.com/Jeffrey4899/PLAX_EF_Labels_202509
Authors
- Yaser S. Abu‐Mostafa
- Dominic Yurk (ORCID: https://orcid.org/0000-0002-2276-4189)
- Zhiyuan Gao (ORCID: https://orcid.org/0000-0002-7632-8219)
Institutions
- California Institute of Technology (US)
- BioMarin (United States) (US)
Publication Details
- Journal
- The Journal of Machine Learning for Biomedical Imaging
- Published
- 2026-08-27
- DOI
- https://doi.org/10.59275/j.melba.2026-8194
- Primary Topic
- Cardiovascular Function and Risk Factors
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- California Institute of Technology