DE NOVO DISCOVERY AND PRECLINICAL PROFILING OF FILOVIRIDE-X

Filovirus infections, including those caused by Zaire ebolavirus, remain a severe global health threat with limited broad-spectrum therapeutic options. Viral entry depends on host cathepsin-mediated cleavage of the surface glycoprotein (GP), exposing a highly conserved hydrophobic NPC1 receptor-binding pocket. Here, we present the computational design and preclinical profiling of Filoviride-X (C₂₃H₃₄N₂O₃, MW = 386.52 Da), a small-molecule entry inhibitor designed to engage this pocket. Utilizing the cleaved crystal structure (PDB: 5JQ3), alchemical Free Energy Perturbation (FEP+) thermodynamics, in silico mutagenesis protocols, and ADMET profiling, we demonstrate that Filoviride-X exhibits robust binding affinity (ΔG_bind = -8.4 kcal/mol), a high genetic barrier to resistance (GBS = 3.2), favorable oral drug-likeness, zero Lipinski violations, and high synthetic tractability (Synthetic Accessibility Score: 2.8/10). These findings establish Filoviride-X as a promising pan-filoviral therapeutic candidate primed for empirical wet-lab validation.

Authors

Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-08-21
DOI
https://doi.org/10.5281/zenodo.22036219
Primary Topic
Viral Infections and Outbreaks Research
Type
preprint
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DE NOVO DISCOVERY AND PRECLINICAL PROFILING OF FILOVIRIDE-X

Brent Allen Jensen
Zenodo (CERN European Organization for Nuclear Research)
Viral Infections and Outbreaks Research
preprint

DE NOVO DISCOVERY AND PRECLINICAL PROFILING OF FILOVIRIDE-X

Brent Allen Jensen
preprint en

Abstract

Filovirus infections, including those caused by Zaire ebolavirus, remain a severe global health threat with limited broad-spectrum therapeutic options. Viral entry depends on host cathepsin-mediated cleavage of the surface glycoprotein (GP), exposing a highly conserved hydrophobic NPC1 receptor-binding pocket. Here, we present the computational design and preclinical profiling of Filoviride-X (C₂₃H₃₄N₂O₃, MW = 386.52 Da), a small-molecule entry inhibitor designed to engage this pocket. Utilizing the cleaved crystal structure (PDB: 5JQ3), alchemical Free Energy Perturbation (FEP+) thermodynamics, in silico mutagenesis protocols, and ADMET profiling, we demonstrate that Filoviride-X exhibits robust binding affinity (ΔG_bind = -8.4 kcal/mol), a high genetic barrier to resistance (GBS = 3.2), favorable oral drug-likeness, zero Lipinski violations, and high synthetic tractability (Synthetic Accessibility Score: 2.8/10). These findings establish Filoviride-X as a promising pan-filoviral therapeutic candidate primed for empirical wet-lab validation.

Zenodo (CERN European Organization for Nuclear Research)
Affordable and clean energy
Viral Infections and Outbreaks Research
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DE NOVO DISCOVERY AND PRECLINICAL PROFILING OF FILOVIRIDE-X — Brent Allen Jensen · Zenodo (CERN European Organization for Nuclear Research) (2026) | TGRS Research Map | TGRS