A cardiac-related, promoter-proximal, regulatory element shapes chromatin and JAG1 transcription

The Jagged1 ( JAG1 ) gene is essential for cardiac development, yet its tissue-specific transcriptional regulation remains poorly understood. In this study we used an integrative screening approach to identify 19 candidate enhancers within the ±100 kb region flanking the JAG1 locus, among which R7 exhibited the highest activity in dual-luciferase assays. CRISPR/Cas9-mediated deletion of R7 in AC16 cells significantly reduced JAG1 expression, decreased proliferative and migratory capacities, and increased apoptosis. Mechanistically, R7 deletion altered local chromatin contacts and reduced accessibility at CTCF-bound regions near the JAG1 promoter, accompanied by decreased H3K27ac, H3K4me3, RNA polymerase II, and SRF occupancy. These findings identify R7 as a cardiac-associated promoter-proximal regulatory element with enhancer-like activity that contributes to local chromatin organization and transcriptional activity at the JAG1 locus.

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Publication Details

Journal
Life Science Alliance
Published
2026-08-03
DOI
https://doi.org/10.26508/lsa.202503597
Primary Topic
Congenital heart defects research
Type
article
Field-Weighted Citation Impact
0.00

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article

A cardiac-related, promoter-proximal, regulatory element shapes chromatin and JAG1 transcription

Quannan Zhuang, Siyi Lin, Shuolin Li, Wei Sheng et al.
Life Science Alliance
Congenital heart defects research
article

A cardiac-related, promoter-proximal, regulatory element shapes chromatin and JAG1 transcription

Quannan Zhuang, Siyi Lin, Shuolin Li, Wei Sheng, Guoying Huang, Qiang Li, Siyu Sun, Quming Zhao, Feng Wang, Yuan Gao, Zhiyu Feng, Huinan Zhang, Han Gao, Xianghui Huang, Qi Zhang
article en

Abstract

The Jagged1 ( JAG1 ) gene is essential for cardiac development, yet its tissue-specific transcriptional regulation remains poorly understood. In this study we used an integrative screening approach to identify 19 candidate enhancers within the ±100 kb region flanking the JAG1 locus, among which R7 exhibited the highest activity in dual-luciferase assays. CRISPR/Cas9-mediated deletion of R7 in AC16 cells significantly reduced JAG1 expression, decreased proliferative and migratory capacities, and increased apoptosis. Mechanistically, R7 deletion altered local chromatin contacts and reduced accessibility at CTCF-bound regions near the JAG1 promoter, accompanied by decreased H3K27ac, H3K4me3, RNA polymerase II, and SRF occupancy. These findings identify R7 as a cardiac-associated promoter-proximal regulatory element with enhancer-like activity that contributes to local chromatin organization and transcriptional activity at the JAG1 locus.

Life Science AllianceVol. 9(10)
Chinese Academy of Medical Sciences & Peking Union Medical College (CN), Peking Union Medical College Hospital (CN), Children's Hospital of Fudan University (CN), Children’s Hospital of Fudan University Xiamen Branch (CN)
Natural Science Foundation of Xiamen City, National Natural Science Foundation of China, National Key Research and Development Program of China
Openalex Percentile: Top 15%
Congenital heart defects research
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