Prediction‐Based Algorithms for Long‐Range High‐Speed Force Spectroscopy

We present a high-speed force microscopy platform mounted on a confocal microscope with a z sample stage enabling long-range, high-speed force spectroscopy measurements on biological samples. The control software is built on a field-programmable gate array (FPGA)-based data acquisition and processing system, complemented with a custom graphical user insterface (GUI). We introduce smart algorithms based on probe-engagement prediction algorithms that leverage previously measured probe-sample contact to accelerate the probe engagement to mm/s and decelerate it in proximity of contact to user-defined μm/s velocities. This significantly reduces long-range force curve acquisition time and data density. Using this system, we provide proof-of-concept mechanical maps of cell clusters to extract topography and viscoelastic parameters. To further explore the versatility of our system, we probed the forces required to extract membrane tethers from monocytic cells using ultrashort cantilevers functionalised with adhesion molecules. Our system allowed us to cover retract velocities from ~1 μm/s up to ~6000 μm/s, and to explore the dynamics of tether formation at physiologically relevant velocities. Our results show that coupling extended z displacement with the prediction-based engagement algorithms enables rapid, quantitative mechanical mapping of heterogeneous biological samples with large topography variation and supports measurements requiring long distances at high velocities.

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Publication Details

Journal
Journal of Molecular Recognition
Published
2026-08-03
DOI
https://doi.org/10.1002/jmr.70043
Primary Topic
Force Microscopy Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Prediction‐Based Algorithms for Long‐Range High‐Speed Force Spectroscopy

Qingze Zou, Jorge Rodriguez-Ramos, Mar Eroles, Félix Rico et al.
Journal of Molecular Recognition
Force Microscopy Techniques and Applications
article

Prediction‐Based Algorithms for Long‐Range High‐Speed Force Spectroscopy

Qingze Zou, Jorge Rodriguez-Ramos, Mar Eroles, Félix Rico, Lorenzo Villanueva, Yogesh Saravanan, Antoine Couderc
article en

Abstract

We present a high-speed force microscopy platform mounted on a confocal microscope with a z sample stage enabling long-range, high-speed force spectroscopy measurements on biological samples. The control software is built on a field-programmable gate array (FPGA)-based data acquisition and processing system, complemented with a custom graphical user insterface (GUI). We introduce smart algorithms based on probe-engagement prediction algorithms that leverage previously measured probe-sample contact to accelerate the probe engagement to mm/s and decelerate it in proximity of contact to user-defined μm/s velocities. This significantly reduces long-range force curve acquisition time and data density. Using this system, we provide proof-of-concept mechanical maps of cell clusters to extract topography and viscoelastic parameters. To further explore the versatility of our system, we probed the forces required to extract membrane tethers from monocytic cells using ultrashort cantilevers functionalised with adhesion molecules. Our system allowed us to cover retract velocities from ~1 μm/s up to ~6000 μm/s, and to explore the dynamics of tether formation at physiologically relevant velocities. Our results show that coupling extended z displacement with the prediction-based engagement algorithms enables rapid, quantitative mechanical mapping of heterogeneous biological samples with large topography variation and supports measurements requiring long distances at high velocities.

Journal of Molecular RecognitionVol. 39(5)
Rutgers, The State University of New Jersey (US), Inserm (FR), Living Systems (United States) (US)
National Science Foundation, Agence Nationale de la Recherche, HORIZON EUROPE European Research Council
Openalex Percentile: Top 11%
Force Microscopy Techniques and Applications
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