Breaking Barriers in Large Classes: Using Cloud Computing and Computational Biology to Implement Research‐Inspired Curricula in Biochemistry I

Course-based undergraduate research experiences (CUREs) are a high impact instructional approach but are challenging to implement in large lecture courses due to class size and content demands. We describe the evolution of a research-inspired project in a large-enrollment (70+ students) Biochemistry lecture course. Our goal was to integrate a project that complements the rigid content while providing experience working on a novel research project. We addressed access barriers by expanding the use of cloud-based computational techniques, notably Google Colaboratory (Colab), to ensure software accessibility across diverse student devices. The semester-long project is divided into four modules focusing on protein structure and function, culminating in an individual project that studies a novel protein variant and its effects on structure and function. These projects are further supported by a science and math librarian to teach information literacy and data management skills. Since Fall 2024, over 250 students have participated. Student self-assessments demonstrate gains in confidence, particularly in analyzing molecular structures, connecting genetic mutations to protein function, and using scientific databases like UniProt. This model shows that research-inspired curricula can be successfully integrated into large, content-heavy lecture courses by leveraging accessible cloud-computing resources.

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Publication Details

Journal
Biochemistry and Molecular Biology Education
Published
2026-07-26
DOI
https://doi.org/10.1002/bmb.70069
Primary Topic
Genetics, Bioinformatics, and Biomedical Research
Type
article
Field-Weighted Citation Impact
0.00
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article

Breaking Barriers in Large Classes: Using Cloud Computing and Computational Biology to Implement Research‐Inspired Curricula in Biochemistry I

Christopher Berndsen, Angela Kayll, Alyssa Young, Angelina M. Sardelli et al.
Biochemistry and Molecular Biology Education
Genetics, Bioinformatics, and Biomedical Research
article

Breaking Barriers in Large Classes: Using Cloud Computing and Computational Biology to Implement Research‐Inspired Curricula in Biochemistry I

Christopher Berndsen, Angela Kayll, Alyssa Young, Angelina M. Sardelli, S. Scanlan, Kathryn E. Shenk
article en

Abstract

Course-based undergraduate research experiences (CUREs) are a high impact instructional approach but are challenging to implement in large lecture courses due to class size and content demands. We describe the evolution of a research-inspired project in a large-enrollment (70+ students) Biochemistry lecture course. Our goal was to integrate a project that complements the rigid content while providing experience working on a novel research project. We addressed access barriers by expanding the use of cloud-based computational techniques, notably Google Colaboratory (Colab), to ensure software accessibility across diverse student devices. The semester-long project is divided into four modules focusing on protein structure and function, culminating in an individual project that studies a novel protein variant and its effects on structure and function. These projects are further supported by a science and math librarian to teach information literacy and data management skills. Since Fall 2024, over 250 students have participated. Student self-assessments demonstrate gains in confidence, particularly in analyzing molecular structures, connecting genetic mutations to protein function, and using scientific databases like UniProt. This model shows that research-inspired curricula can be successfully integrated into large, content-heavy lecture courses by leveraging accessible cloud-computing resources.

Biochemistry and Molecular Biology Education
James Madison University (US)
Quality Education
Openalex Percentile: Top 14%
Genetics, Bioinformatics, and Biomedical Research
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