Genome‐Wide Screening of Phase Separation Proteins and Functional Dissection of Candidate Proteins for Saline‐Alkali Stress Tolerance in Soybean

Summary statement We designed a bioinformatics pipeline combining PSPredictor and Metapredict to systematically identify phase separation proteins in soybean, yielding a total of 5515 candidates. Experimental validation confirmed that four nuclear‐localized proteins are capable of forming dynamic liquid‐like condensates through liquid–liquid phase separation both in vivo and in vitro. In addition, saline‐alkali tolerance assays revealed that GmBAF60b, GmFCA and GmPUX5 significantly enhance stress tolerance by lowering Na + /K + ratios and boosting antioxidant enzyme activities. These findings provide key genetic resources and mechanistic insights into LLPS‐mediated stress adaptation in crops.

Authors

Institutions

Publication Details

Journal
Plant Cell & Environment
Published
2026-07-26
DOI
https://doi.org/10.1111/pce.70778
Primary Topic
RNA Research and Splicing
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Genome‐Wide Screening of Phase Separation Proteins and Functional Dissection of Candidate Proteins for Saline‐Alkali Stress Tolerance in Soybean

Xiaohuan Sun, Haishan Liu, Zhangxiong Liu, Fujing Liu et al.
Plant Cell & Environment
RNA Research and Splicing
article

Genome‐Wide Screening of Phase Separation Proteins and Functional Dissection of Candidate Proteins for Saline‐Alkali Stress Tolerance in Soybean

Xiaohuan Sun, Haishan Liu, Zhangxiong Liu, Fujing Liu, Xiaodong Ding, Qiang Li, Minglong Li, Shuzhen Zhang, Jialei Xiao, Huang Xiaoya, Xin Zhao, Xin Liu
article en

Abstract

Summary statement We designed a bioinformatics pipeline combining PSPredictor and Metapredict to systematically identify phase separation proteins in soybean, yielding a total of 5515 candidates. Experimental validation confirmed that four nuclear‐localized proteins are capable of forming dynamic liquid‐like condensates through liquid–liquid phase separation both in vivo and in vitro. In addition, saline‐alkali tolerance assays revealed that GmBAF60b, GmFCA and GmPUX5 significantly enhance stress tolerance by lowering Na + /K + ratios and boosting antioxidant enzyme activities. These findings provide key genetic resources and mechanistic insights into LLPS‐mediated stress adaptation in crops.

Plant Cell & Environment
Northeast Agricultural University (CN), Shanghai Jiao Tong University (CN), Mudanjiang Medical University (CN), Heilongjiang Provincial Academy of Agricultural Sciences (CN), Mudanjiang Normal University (CN), Institute of Crop Sciences (CN)
National Natural Science Foundation of China, Natural Science Foundation of Heilongjiang Province
Zero hunger
Openalex Percentile: Top 15%
RNA Research and Splicing
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.