EPRA U-Net: an efficient pyramid residual attention framework for accurate infarct segmentation in diffusion-weighted MRI

Accurate identification of acute ischemic infarcts on diffusion-weighted magnetic resonance imaging (DWI) is a critical prerequisite for reliable lesion quantification and effective clinical decision support in the management of cerebrovascular events. This study presents EPRA U-Net (Efficient Pyramid Residual Attention U-Net), a task-specific integrated architecture for efficient and accurate infarct segmentation of DWI images. In the proposed architecture, an EfficientNet-based encoder was used as a hierarchical feature extractor with a minimized parameterization. In addition, a Residual-Recurrent (R2) block (recurrent unrolling step t = 2, following the original formulation) and Atrous Spatial Pyramid Pooling (ASPP) were integrated to enhance the performance of spatial dependency modeling. Additionally, a dual attention mechanism was incorporated to highlight lesion-related activations while concurrently enabling the suppression of extraneous background responses. To prioritize lesion detection consistent with clinical imperative, a Tversky loss function (α = 0.4, β = 0.6) was adopted, thereby emphasizing the sensitivity of detection over its specificity during the optimization process. Experimental evaluations were conducted utilizing an in-house dataset comprising 167 patients with 4,895 DWI slices; subsequently, the performance of the proposed EPRA U-Net was assessed in comparison with state-of-the-art models, specifically UNet++, DeepLabV3+, and TransUNet. The experimental results suggest that EPRA U-Net attained superior performance, evidenced by a pixel-aggregated Dice of 0.8984, a per-sample Dice of 0.9469, an IoU of 0.8155, a Recall of 0.8887, a Lesion F1 of 0.9378, and an HD95 of 11.62 px (median: 2.00 px). Furthermore, a clear reduction in the rate of missed lesions, specifically by 16%, 25%, and 29%, was observed when compared with UNet++, DeepLabV3+, and TransUNet, respectively. Additionally, a comprehensive ablation study was systematically conducted. These findings suggest that the proposed architecture affords a more robust and accurate infarct segmentation, consequently facilitating a more reliable estimation of treatment eligibility.

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Publication Details

Journal
BMC Medical Imaging
Published
2026-07-24
DOI
https://doi.org/10.1186/s12880-026-02569-9
Primary Topic
Advanced Neuroimaging Techniques and Applications
Type
article
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article

EPRA U-Net: an efficient pyramid residual attention framework for accurate infarct segmentation in diffusion-weighted MRI

Hasan Ulutaş, Şengül Doğan, Muhammet Emin Şahin, Serkan Kıranyaz et al.
BMC Medical Imaging
Advanced Neuroimaging Techniques and Applications
article

EPRA U-Net: an efficient pyramid residual attention framework for accurate infarct segmentation in diffusion-weighted MRI

Hasan Ulutaş, Şengül Doğan, Muhammet Emin Şahin, Serkan Kıranyaz, Esra Yüce, T Tuncer, Mustafa Fatih Erkoc
article en

Abstract

Accurate identification of acute ischemic infarcts on diffusion-weighted magnetic resonance imaging (DWI) is a critical prerequisite for reliable lesion quantification and effective clinical decision support in the management of cerebrovascular events. This study presents EPRA U-Net (Efficient Pyramid Residual Attention U-Net), a task-specific integrated architecture for efficient and accurate infarct segmentation of DWI images. In the proposed architecture, an EfficientNet-based encoder was used as a hierarchical feature extractor with a minimized parameterization. In addition, a Residual-Recurrent (R2) block (recurrent unrolling step t = 2, following the original formulation) and Atrous Spatial Pyramid Pooling (ASPP) were integrated to enhance the performance of spatial dependency modeling. Additionally, a dual attention mechanism was incorporated to highlight lesion-related activations while concurrently enabling the suppression of extraneous background responses. To prioritize lesion detection consistent with clinical imperative, a Tversky loss function (α = 0.4, β = 0.6) was adopted, thereby emphasizing the sensitivity of detection over its specificity during the optimization process. Experimental evaluations were conducted utilizing an in-house dataset comprising 167 patients with 4,895 DWI slices; subsequently, the performance of the proposed EPRA U-Net was assessed in comparison with state-of-the-art models, specifically UNet++, DeepLabV3+, and TransUNet. The experimental results suggest that EPRA U-Net attained superior performance, evidenced by a pixel-aggregated Dice of 0.8984, a per-sample Dice of 0.9469, an IoU of 0.8155, a Recall of 0.8887, a Lesion F1 of 0.9378, and an HD95 of 11.62 px (median: 2.00 px). Furthermore, a clear reduction in the rate of missed lesions, specifically by 16%, 25%, and 29%, was observed when compared with UNet++, DeepLabV3+, and TransUNet, respectively. Additionally, a comprehensive ablation study was systematically conducted. These findings suggest that the proposed architecture affords a more robust and accurate infarct segmentation, consequently facilitating a more reliable estimation of treatment eligibility.

BMC Medical Imaging
Izmir University (TR), Fırat University (TR), Yozgat Bozok Üniversitesi (TR), Bakırçay Üniversitesi, Qatar University (QA)
Peace, Justice and strong institutions
Openalex Percentile: Top 9%
Advanced Neuroimaging Techniques and Applications
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