First eDNA-based record of Carcharhinus melanopterus (Quoy & Gaimard, 1824) (Carcharhiniformes, Carcharhinidae) from Mantanani Island, Sabah, Malaysia

The first molecular occurrence record of the Blacktip Reef Shark, Carcharhinus melanopterus (Quoy & Gaimard, 1824), is documented from Mantanani Island, Sabah, Malaysia, based on environmental DNA (eDNA) metabarcoding. Surface seawater collected from two seagrass sites on 9 May 2024 and analyzed using MiFish 12S rRNA primers. A single 155-bp operational taxonomic unit matching C. melanopterus with 100% identity to MitoFish reference sequences was recovered exclusively from one of the sampled sites (20,881 reads). No reads were detected at the other site or in negative controls. Sequence data are deposited in NCBI SRA (BioProject PRJNA1460790).

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Published
2026-07-24
DOI
https://doi.org/10.15560/22.4.667
Primary Topic
Environmental DNA in Biodiversity Studies
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article
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article

First eDNA-based record of Carcharhinus melanopterus (Quoy & Gaimard, 1824) (Carcharhiniformes, Carcharhinidae) from Mantanani Island, Sabah, Malaysia

Cheng-Ann Chen, Juanita Joseph, Wei-Ling Ng, Tadashi Kajita et al.
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Environmental DNA in Biodiversity Studies
article

First eDNA-based record of Carcharhinus melanopterus (Quoy & Gaimard, 1824) (Carcharhiniformes, Carcharhinidae) from Mantanani Island, Sabah, Malaysia

Cheng-Ann Chen, Juanita Joseph, Wei-Ling Ng, Tadashi Kajita, Muhamad Arif Ng Abdullah
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Abstract

The first molecular occurrence record of the Blacktip Reef Shark, Carcharhinus melanopterus (Quoy & Gaimard, 1824), is documented from Mantanani Island, Sabah, Malaysia, based on environmental DNA (eDNA) metabarcoding. Surface seawater collected from two seagrass sites on 9 May 2024 and analyzed using MiFish 12S rRNA primers. A single 155-bp operational taxonomic unit matching C. melanopterus with 100% identity to MitoFish reference sequences was recovered exclusively from one of the sampled sites (20,881 reads). No reads were detected at the other site or in negative controls. Sequence data are deposited in NCBI SRA (BioProject PRJNA1460790).

Check ListVol. 22(4)
Universiti of Malaysia Sabah (MY), University of the Ryukyus (JP)
Universiti Malaysia Sabah, Sabah Biodiversity Centre
Life below water
Openalex Percentile: Top 9%
Environmental DNA in Biodiversity Studies
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First eDNA-based record of Carcharhinus melanopterus (Quoy & Gaimard, 1824) (Carcharhiniformes, Carcharhinidae) from Mantanani Island, Sabah, Malaysia — Cheng-Ann Chen, Juanita Joseph, et al. · Check List (2026) | TGRS Research Map | TGRS