Poly(ADP-Ribose) polymerase1 Has Potential to Facilitate the Nucleosome Disassembly

Being the basic building blocks of chromatin, nucleosomes and their stability determine the genome accessibility for different DNA-dependent proteins. This characteristic is labile under cell-life processes. One of the abundant DNA-binding proteins, which is important for genome compaction, is poly(ADP-ribose) polymerase1 (PARP1). Despite the extensive experimental data on the chromatin compaction regulation under ADP-ribosylation, the details of the interplay of nucleosome with PARP1 in the absence of protein activation remain unclear. In this study, we discovered unusual changes of the nucleosome wrapping strength upon PARP1 interaction using a single-molecule approach—optical tweezers. We demonstrated that PARP1 binding leads to weakening of the contacts of inner DNA turn in nucleosome.

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Journal
International Journal of Molecular Sciences
Published
2026-07-24
DOI
https://doi.org/10.3390/ijms27156599
Primary Topic
PARP inhibition in cancer therapy
Type
article
Field-Weighted Citation Impact
0.00

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article

Poly(ADP-Ribose) polymerase1 Has Potential to Facilitate the Nucleosome Disassembly

М. А. Ходорковский, Alexander A. Ukraintsev, Aleksandra Vasileva, Aleksandr Alekseev et al.
International Journal of Molecular Sciences
PARP inhibition in cancer therapy
article

Poly(ADP-Ribose) polymerase1 Has Potential to Facilitate the Nucleosome Disassembly

М. А. Ходорковский, Alexander A. Ukraintsev, Aleksandra Vasileva, Aleksandr Alekseev, E. A. Belousova, Mikhail M. Kutuzov, I D Goncharov, Olga I. Lavrik
article en

Abstract

Being the basic building blocks of chromatin, nucleosomes and their stability determine the genome accessibility for different DNA-dependent proteins. This characteristic is labile under cell-life processes. One of the abundant DNA-binding proteins, which is important for genome compaction, is poly(ADP-ribose) polymerase1 (PARP1). Despite the extensive experimental data on the chromatin compaction regulation under ADP-ribosylation, the details of the interplay of nucleosome with PARP1 in the absence of protein activation remain unclear. In this study, we discovered unusual changes of the nucleosome wrapping strength upon PARP1 interaction using a single-molecule approach—optical tweezers. We demonstrated that PARP1 binding leads to weakening of the contacts of inner DNA turn in nucleosome.

International Journal of Molecular SciencesVol. 27(15)
Peter the Great St. Petersburg Polytechnic University (RU), Institute of Chemical Biology and Fundamental Medicine (RU)
Francis Crick Institute, University College London, Siberian Branch, Russian Academy of Sciences, Russian Science Foundation
Responsible consumption and production
Openalex Percentile: Top 11%
PARP inhibition in cancer therapy
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Poly(ADP-Ribose) polymerase1 Has Potential to Facilitate the Nucleosome Disassembly — М. А. Ходорковский, Alexander A. Ukraintsev, et al. · International Journal of Molecular Sciences (2026) | TGRS Research Map | TGRS