LncRNA MKRN3-AS1 promotes metastasis and autophagy of hepatocellular carcinoma by sponging multiple microRNAs

Hepatocellular carcinoma is one of the most common malignant tumors with poor clinical outcomes. Increasing numbers of long noncoding RNAs have been shown to be involved in the carcinogenesis and progression of HCC. However, the expressions, clinical significances, and roles of most lncRNAs in HCC are still unknown. In clinical samples, we utilized qPCR assays to measure the expression level of lncRNA MKRN3-AS1 in hepatocellular carcinoma (HCC) tissues compared with normal/adjacent tissues and analyzed its correlation with patient prognosis. Gain-of-function and loss-of-function experiments were performed in HCC cells to examine the effects of lncRNA MKRN3-AS1 on cell migration, invasion, and autophagy. For mechanistic investigation, bioinformatics analysis and molecular biology experiments were employed to verify the role of MKRN3-AS1 as a competitive endogenous RNA. Additionally, a mouse metastatic tumor model was established via tail vein injection to observe the impact of MKRN3-AS1 on lung metastasis of hepatocellular carcinoma. We found that lncRNA MKRN3-AS1 was dramatically upregulated in HCC tissues and associated with poor prognosis. Functionally, lncRNA MKRN3-AS1 promoted migration, invasion and autophagy of HCC cells. Mechanistically, MKRN3-AS1 acted as a "molecular sponge" for multiple miRNAs. By targeting miR-601, MKRN3-AS1 upregulate the expression of ZEB1, which directly promoted the invasion and migration of HCC cells. In addition, MKRN3-AS1 promoted autophagy via the miR-4487/ULK1 and miR-6881-3p/ATG5-ATG7 axes, which may enhance the stemness of HCC cells and thereby indirectly facilitate tumor invasion and migration. In mouse model, over-expression of MKRN3-AS1 facilitated lung metastasis of HCC. Collectively, The oncogenic function of MKRN3-AS1 in hepatocellular carcinoma may be attributed to its regulation of the miR-601/ZEB1, miR-4487/ULK1, and miR-6881-3p/ATG5-ATG7 signaling axes. Our findings suggest that MKRN3-AS1 may be a potential prognostic biomarker and therapeutic target for HCC.

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Journal
Scientific Reports
Published
2026-07-17
DOI
https://doi.org/10.1038/s41598-026-62640-x
Primary Topic
Cancer-related molecular mechanisms research
Type
article
Field-Weighted Citation Impact
0.00

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article

LncRNA MKRN3-AS1 promotes metastasis and autophagy of hepatocellular carcinoma by sponging multiple microRNAs

Jizhe Liu, Niangmei Cheng, Fang Wang, Yindan Zhang et al.
Scientific Reports
Cancer-related molecular mechanisms research
article

LncRNA MKRN3-AS1 promotes metastasis and autophagy of hepatocellular carcinoma by sponging multiple microRNAs

Jizhe Liu, Niangmei Cheng, Fang Wang, Yindan Zhang, Bixing Zhao, Yingchao Wang, Xiaoyuan Zheng, Jingfeng Liu, Yang Zhou, Gaoxiong Wang, Dong Liang, Liping Yang
article en

Abstract

Hepatocellular carcinoma is one of the most common malignant tumors with poor clinical outcomes. Increasing numbers of long noncoding RNAs have been shown to be involved in the carcinogenesis and progression of HCC. However, the expressions, clinical significances, and roles of most lncRNAs in HCC are still unknown. In clinical samples, we utilized qPCR assays to measure the expression level of lncRNA MKRN3-AS1 in hepatocellular carcinoma (HCC) tissues compared with normal/adjacent tissues and analyzed its correlation with patient prognosis. Gain-of-function and loss-of-function experiments were performed in HCC cells to examine the effects of lncRNA MKRN3-AS1 on cell migration, invasion, and autophagy. For mechanistic investigation, bioinformatics analysis and molecular biology experiments were employed to verify the role of MKRN3-AS1 as a competitive endogenous RNA. Additionally, a mouse metastatic tumor model was established via tail vein injection to observe the impact of MKRN3-AS1 on lung metastasis of hepatocellular carcinoma. We found that lncRNA MKRN3-AS1 was dramatically upregulated in HCC tissues and associated with poor prognosis. Functionally, lncRNA MKRN3-AS1 promoted migration, invasion and autophagy of HCC cells. Mechanistically, MKRN3-AS1 acted as a "molecular sponge" for multiple miRNAs. By targeting miR-601, MKRN3-AS1 upregulate the expression of ZEB1, which directly promoted the invasion and migration of HCC cells. In addition, MKRN3-AS1 promoted autophagy via the miR-4487/ULK1 and miR-6881-3p/ATG5-ATG7 axes, which may enhance the stemness of HCC cells and thereby indirectly facilitate tumor invasion and migration. In mouse model, over-expression of MKRN3-AS1 facilitated lung metastasis of HCC. Collectively, The oncogenic function of MKRN3-AS1 in hepatocellular carcinoma may be attributed to its regulation of the miR-601/ZEB1, miR-4487/ULK1, and miR-6881-3p/ATG5-ATG7 signaling axes. Our findings suggest that MKRN3-AS1 may be a potential prognostic biomarker and therapeutic target for HCC.

Scientific Reports
Fujian University of Traditional Chinese Medicine (CN), Fujian Medical University (CN), Mengchao Hepatobiliary Hospital (CN), Second Affiliated Hospital of Fujian Medical University (CN), Fujian Provincial Cancer Hospital (CN), Fujian Agriculture and Forestry University (CN)
National Natural Science Foundation of China, Natural Science Foundation of Fujian Province
No poverty
Openalex Percentile: Top 11%
Cancer-related molecular mechanisms research
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