SAP18 drives vasculogenic mimicry in esophageal squamous cell carcinoma: a machine learning and multi-omics investigation

Vasculogenic mimicry (VM), a novel endothelial-independent blood perfusion pathway, is linked to advanced stage and poor prognosis in esophageal squamous cell carcinoma (ESCC). In this study, by integrating single-cell RNA sequencing and transcriptomic data and employing a machine learning framework incorporating 117 algorithmic combinations, we constructed a robust 4-VM-related gene prognostic model for ESCC. Consensus clustering further stratified patients into two subtypes. The high-risk subtype (C2) was characterized by unfavorable prognosis, activated stroma, enrichment of M2 macrophages, and multidrug resistance. As the core regulatory hub of this model, SAP18 was markedly upregulated in ESCC tissues and showed positive correlations with aggressive clinicopathological features. Mechanistically, SAP18 binds to PIK3CB, activating the AKT/mTOR signaling cascade and upregulating HIF-1α, thereby conferring VM-forming capability to epithelial-derived tumor cells. Both in vitro and in vivo experiments confirmed that knockdown of SAP18 significantly suppressed malignant phenotypes in ESCC. Pharmacological intervention using the highly selective AKT inhibitor MK-2206 effectively abolished VM network formation and profoundly inhibited tumor growth. Our integrated multi-omics and functional analyses decipher the molecular architecture of VM in ESCC, nominating SAP18 as a precise prognostic biomarker and therapeutic target, and providing a foundation for individualized VM-targeted strategies in ESCC management.

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Publication Details

Journal
npj Precision Oncology
Published
2026-07-01
DOI
https://doi.org/10.1038/s41698-026-01582-z
Primary Topic
Angiogenesis and VEGF in Cancer
Type
article
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article

SAP18 drives vasculogenic mimicry in esophageal squamous cell carcinoma: a machine learning and multi-omics investigation

Ruyue Zhang, L Wang, Jiajia Du, Lei Wang et al.
npj Precision Oncology
Angiogenesis and VEGF in Cancer
article

SAP18 drives vasculogenic mimicry in esophageal squamous cell carcinoma: a machine learning and multi-omics investigation

Ruyue Zhang, L Wang, Jiajia Du, Lei Wang, J Ge, Qingwen Zhu, Bo You, Yanru Qin, Tian Xia
article en

Abstract

Vasculogenic mimicry (VM), a novel endothelial-independent blood perfusion pathway, is linked to advanced stage and poor prognosis in esophageal squamous cell carcinoma (ESCC). In this study, by integrating single-cell RNA sequencing and transcriptomic data and employing a machine learning framework incorporating 117 algorithmic combinations, we constructed a robust 4-VM-related gene prognostic model for ESCC. Consensus clustering further stratified patients into two subtypes. The high-risk subtype (C2) was characterized by unfavorable prognosis, activated stroma, enrichment of M2 macrophages, and multidrug resistance. As the core regulatory hub of this model, SAP18 was markedly upregulated in ESCC tissues and showed positive correlations with aggressive clinicopathological features. Mechanistically, SAP18 binds to PIK3CB, activating the AKT/mTOR signaling cascade and upregulating HIF-1α, thereby conferring VM-forming capability to epithelial-derived tumor cells. Both in vitro and in vivo experiments confirmed that knockdown of SAP18 significantly suppressed malignant phenotypes in ESCC. Pharmacological intervention using the highly selective AKT inhibitor MK-2206 effectively abolished VM network formation and profoundly inhibited tumor growth. Our integrated multi-omics and functional analyses decipher the molecular architecture of VM in ESCC, nominating SAP18 as a precise prognostic biomarker and therapeutic target, and providing a foundation for individualized VM-targeted strategies in ESCC management.

npj Precision Oncology
Sun Yat-sen University (CN), Nantong University (CN), Affiliated Hospital of Nantong University (CN), Sichuan Cancer Hospital (CN), Sun Yat-sen University Cancer Center (CN), First Affiliated Hospital of Zhengzhou University (CN)
No poverty
Openalex Percentile: Top 11%
Angiogenesis and VEGF in Cancer
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