Photochemical and Conformational Analyses of Chlorophyll <i>a</i> : Contribution of the Phytol Chain in the Absorption Spectrum

ABSTRACT Chlorophyll a has been extensively studied due to its role as the primary pigment responsible for oxygenic photosynthesis. However, the complexity of the molecule has led many theoretical studies to simplify its structure, often removing the phytol chain—a hydrocarbon tail—under the assumption that it does not alter the photochemical properties of chlorophyll. To achieve more accurate results, it is essential to determine whether the phytol chain influences key photochemical properties, such as the absorption spectrum. In this work, we conducted a conformational study of chlorophyll a to determine the most populated conformer using Density Functional Theory (DFT) calculations. We investigate the influence of the phytol chain on the coordination interactions between nitrogen atoms and the magnesium ion, as well as its impact on vertical excitation using the Time‐Dependent DFT (TD‐DFT) approach. Our results demonstrate that the phytol chain contributes slightly to all excited states. These findings underscore the role of the complete molecular structure in vacuum and introduce critical inquiries regarding the phytol chain relevance in more complex environments.

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Publication Details

Journal
International Journal of Quantum Chemistry
Published
2026-07-02
DOI
https://doi.org/10.1002/qua.70251
Primary Topic
Photosynthetic Processes and Mechanisms
Type
article
Field-Weighted Citation Impact
0.00

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article

Photochemical and Conformational Analyses of Chlorophyll a : Contribution of the Phytol Chain in the Absorption Spectrum

María Eugenia Castro, Francisco J. Meléndez, Joaquı́n Barroso-Flores, Yamil Hernández Urquieta
International Journal of Quantum Chemistry
Photosynthetic Processes and Mechanisms
article

Photochemical and Conformational Analyses of Chlorophyll a : Contribution of the Phytol Chain in the Absorption Spectrum

María Eugenia Castro, Francisco J. Meléndez, Joaquı́n Barroso-Flores, Yamil Hernández Urquieta
article en

Abstract

ABSTRACT Chlorophyll a has been extensively studied due to its role as the primary pigment responsible for oxygenic photosynthesis. However, the complexity of the molecule has led many theoretical studies to simplify its structure, often removing the phytol chain—a hydrocarbon tail—under the assumption that it does not alter the photochemical properties of chlorophyll. To achieve more accurate results, it is essential to determine whether the phytol chain influences key photochemical properties, such as the absorption spectrum. In this work, we conducted a conformational study of chlorophyll a to determine the most populated conformer using Density Functional Theory (DFT) calculations. We investigate the influence of the phytol chain on the coordination interactions between nitrogen atoms and the magnesium ion, as well as its impact on vertical excitation using the Time‐Dependent DFT (TD‐DFT) approach. Our results demonstrate that the phytol chain contributes slightly to all excited states. These findings underscore the role of the complete molecular structure in vacuum and introduce critical inquiries regarding the phytol chain relevance in more complex environments.

International Journal of Quantum ChemistryVol. 126(13)
Universidad Autónoma del Estado de México (MX), Benemérita Universidad Autónoma de Puebla (MX), Universidad Nacional Autónoma de México (MX)
Secretaría de Educación Pública, Vicerrectoría de Investigación y Estudios de Posgrado, Benemérita Universidad Autónoma de Puebla
Openalex Percentile: Top 12%
Photosynthetic Processes and Mechanisms
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