Catalytic Promiscuity and Cascade Reaction Mechanism of Ketosteroid Isomerases for Addition Reactions of Cyclic Enones

Steroidal medicines are a vital class of pharmaceuticals, with their active ingredients primarily derived from natural steroids. A key step in their biosynthesis involves the isomerization of ∆5−3-ketosteroids to ∆4−3-ketosteroids, catalyzed by ketosteroid isomerase (KSI). In this study, we discover that KSI exhibits an unexpected catalytic promiscuity, efficiently converting cyclic enones into homo- and hetero-addition products. Crystal structures of KSI variants and mutagenesis reveal the homo-dimeric interface as another active center. Molecular dynamics simulations and quantum mechanics/molecular mechanics calculations suggest a cascade catalytic mechanism by a single enzyme, in which isomerization occurs in the monomeric pocket, while the addition reaction preferentially occurs at the homo-dimeric interface due to reduced steric hindrance. These results not only provide valuable insights into the catalytic diversity of KSIs, but also inspire further exploration of new-to-nature and diverse catalytic properties of enzymes, thus expanding their applications in biocatalysis and drug development. A key step in the biosynthesis of steroidal medicines is the isomerization of ∆5 −3- ketosteroids to ∆4 −3- ketosteroids, catalysed by ketosteroid isomerase (KSI). Here, the authors report that KSI efficiently converts cyclic enones into homo- and hetero-addition products, and determine the crystal structure to reveal the homo-dimeric interface as another active center.

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Publication Details

Journal
Nature Communications
Published
2026-07-02
DOI
https://doi.org/10.1038/s41467-026-75180-9
Primary Topic
Signaling Pathways in Disease
Type
article
Field-Weighted Citation Impact
0.00

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article

Catalytic Promiscuity and Cascade Reaction Mechanism of Ketosteroid Isomerases for Addition Reactions of Cyclic Enones

Dunming Zhu, R X Zhang, Xiang Sheng, 鲍锦库 et al.
Nature Communications
Signaling Pathways in Disease
article

Catalytic Promiscuity and Cascade Reaction Mechanism of Ketosteroid Isomerases for Addition Reactions of Cyclic Enones

Dunming Zhu, R X Zhang, Xiang Sheng, 鲍锦库, Jinhui Feng, Qiaqing Wu, Yiyin Liu, Weidong Liu, Yangyang Chen, Chuanfang Wu, Mengsha Li, Xuemei Li
article en

Abstract

Steroidal medicines are a vital class of pharmaceuticals, with their active ingredients primarily derived from natural steroids. A key step in their biosynthesis involves the isomerization of ∆5−3-ketosteroids to ∆4−3-ketosteroids, catalyzed by ketosteroid isomerase (KSI). In this study, we discover that KSI exhibits an unexpected catalytic promiscuity, efficiently converting cyclic enones into homo- and hetero-addition products. Crystal structures of KSI variants and mutagenesis reveal the homo-dimeric interface as another active center. Molecular dynamics simulations and quantum mechanics/molecular mechanics calculations suggest a cascade catalytic mechanism by a single enzyme, in which isomerization occurs in the monomeric pocket, while the addition reaction preferentially occurs at the homo-dimeric interface due to reduced steric hindrance. These results not only provide valuable insights into the catalytic diversity of KSIs, but also inspire further exploration of new-to-nature and diverse catalytic properties of enzymes, thus expanding their applications in biocatalysis and drug development. A key step in the biosynthesis of steroidal medicines is the isomerization of ∆5 −3- ketosteroids to ∆4 −3- ketosteroids, catalysed by ketosteroid isomerase (KSI). Here, the authors report that KSI efficiently converts cyclic enones into homo- and hetero-addition products, and determine the crystal structure to reveal the homo-dimeric interface as another active center.

Nature Communications
Sichuan University (CN), Tianjin Institute of Industrial Biotechnology (CN)
National Natural Science Foundation of China, Chinese Academy of Sciences
Openalex Percentile: Top 12%
Signaling Pathways in Disease
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