Stable lineages, rewired landscapes: single‐cell and spatial multi‐omics reveal developmental plasticity under abiotic stress

Plants are constantly challenged by environmental stressors, yet their sessile nature demands highly flexible developmental programs to maintain growth and survival. With the advent of single-cell technologies, developmental plasticity can now be dissected at cellular resolution. Two recent Populus studies show that both mechanical and drought stress induce xylem remodeling by shifting cell-type ratios or altering differentiation speed, while preserving the underlying developmental lineages. Highly similar patterns have been recently observed in Arabidopsis and cabbage, in which osmotic and salt stress alter the tempo of root hair differentiation without changing lineage identity. The recurrence of this developmental program across woody and herbaceous species, spanning distinct taxonomic orders, suggests that lineage-stable yet flexible stress responses are evolutionarily conserved in plants. Moreover, these insights were enabled by the application of advanced single-cell and spatially resolved approaches, with several of these studies incorporating single-cell/nucleus transcriptomics with spatial multi-omics analyses to link developmental dynamics with tissue context. This balance between flexibility and developmental order may represent a fundamental principle by which plants maintain resilience under diverse environmental challenges and may offer a valid framework for this field of study.

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Publication Details

Journal
New Phytologist
Published
2026-06-30
DOI
https://doi.org/10.1111/nph.71374
Primary Topic
Plant Molecular Biology Research
Type
article
Field-Weighted Citation Impact
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article

Stable lineages, rewired landscapes: single‐cell and spatial multi‐omics reveal developmental plasticity under abiotic stress

Quanzi Li, Ying‐Lan Chen, Jo‐Wei Allison Hsieh, Ying‐Chung Jimmy Lin et al.
New Phytologist
Plant Molecular Biology Research
article

Stable lineages, rewired landscapes: single‐cell and spatial multi‐omics reveal developmental plasticity under abiotic stress

Quanzi Li, Ying‐Lan Chen, Jo‐Wei Allison Hsieh, Ying‐Chung Jimmy Lin, Zhifeng Wang, Jia Wei, Chia-Chen Chu, Dian‐Xuan Yang, Ching‐Wei Lu
article en

Abstract

Plants are constantly challenged by environmental stressors, yet their sessile nature demands highly flexible developmental programs to maintain growth and survival. With the advent of single-cell technologies, developmental plasticity can now be dissected at cellular resolution. Two recent Populus studies show that both mechanical and drought stress induce xylem remodeling by shifting cell-type ratios or altering differentiation speed, while preserving the underlying developmental lineages. Highly similar patterns have been recently observed in Arabidopsis and cabbage, in which osmotic and salt stress alter the tempo of root hair differentiation without changing lineage identity. The recurrence of this developmental program across woody and herbaceous species, spanning distinct taxonomic orders, suggests that lineage-stable yet flexible stress responses are evolutionarily conserved in plants. Moreover, these insights were enabled by the application of advanced single-cell and spatially resolved approaches, with several of these studies incorporating single-cell/nucleus transcriptomics with spatial multi-omics analyses to link developmental dynamics with tissue context. This balance between flexibility and developmental order may represent a fundamental principle by which plants maintain resilience under diverse environmental challenges and may offer a valid framework for this field of study.

New Phytologist
Zhejiang A & F University (CN), National Chung Hsing University (TW), National Taiwan University (TW), ZheJiang Academy of Agricultural Sciences (CN), National Cheng Kung University (TW)
Openalex Percentile: Top 8%
Plant Molecular Biology Research
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