GraPhAI: Neural Networks for Solving Centrosymmetric Crystal Structures

High Resolution Image Download MS PowerPoint Slide Crystal structure determination from low-resolution diffraction data is challenging due to the lack of a general-purpose method for solving the crystallographic phase problem. We have developed a graph neural network, GraPhAI, and propose a new and efficient diffraction data representation in a graph form for deep learning. The trained GraPhAI models are intended for ab initio phasing of down to 2 Å resolution data of typical unit-cell volume centrosymmetric crystal structures. The success rate is above 80% for structures containing an atom with Z ≥ 19 (e.g., metal–organic frameworks, coordination compounds, or inorganic structures). For purely organic crystal structures, the success so far is limited.

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Publication Details

Journal
Journal of the American Chemical Society
Published
2026-06-30
DOI
https://doi.org/10.1021/jacs.6c05607
Primary Topic
Metal-Organic Frameworks: Synthesis and Applications
Type
article
Field-Weighted Citation Impact
0.00
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article

GraPhAI: Neural Networks for Solving Centrosymmetric Crystal Structures

Toms Rekis, Džonatans Miks Melgalvis
Journal of the American Chemical Society
Metal-Organic Frameworks: Synthesis and Applications
article

GraPhAI: Neural Networks for Solving Centrosymmetric Crystal Structures

Toms Rekis, Džonatans Miks Melgalvis
article en

Abstract

High Resolution Image Download MS PowerPoint Slide Crystal structure determination from low-resolution diffraction data is challenging due to the lack of a general-purpose method for solving the crystallographic phase problem. We have developed a graph neural network, GraPhAI, and propose a new and efficient diffraction data representation in a graph form for deep learning. The trained GraPhAI models are intended for ab initio phasing of down to 2 Å resolution data of typical unit-cell volume centrosymmetric crystal structures. The success rate is above 80% for structures containing an atom with Z ≥ 19 (e.g., metal–organic frameworks, coordination compounds, or inorganic structures). For purely organic crystal structures, the success so far is limited.

Journal of the American Chemical Society
Goethe University Frankfurt (DE), Latvia University of Life Sciences and Technologies (LV)
Openalex Percentile: Top 17%
Metal-Organic Frameworks: Synthesis and Applications
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