A Nanopore Direct RNA Sequencing Atlas of RNA Modifications in pig (Sus scrofa domesticus) Testes across Sexual Maturation

RNA modifications represent a crucial layer of post-transcriptional regulation, yet their dynamic landscape during testicular maturation remains largely uncharted. In this study, we employed Nanopore Direct RNA Sequencing to generate a comprehensive epitranscriptomic dataset for porcine testicular tissue at pre-sexual and post-sexual maturation stages. This dataset captures the profiles of four RNA modifications (m⁶A, m⁵C, Ψ, and inosine) across these critical developmental time points. We further characterized the global abundance, distribution, and motif features of these modifications. This resource provides a valuable foundation for elucidating the epitranscriptomic mechanisms governing mammalian testicular development and spermatogenesis.

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Publication Details

Journal
Scientific Data
Published
2026-06-29
DOI
https://doi.org/10.1038/s41597-026-07696-0
Primary Topic
RNA modifications and cancer
Type
article
Field-Weighted Citation Impact
0.00

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article

A Nanopore Direct RNA Sequencing Atlas of RNA Modifications in pig (Sus scrofa domesticus) Testes across Sexual Maturation

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Scientific Data
RNA modifications and cancer
article

A Nanopore Direct RNA Sequencing Atlas of RNA Modifications in pig (Sus scrofa domesticus) Testes across Sexual Maturation

Yi Yang, Ziling Hao, Junxiang Mao, Mailin Gan, Le Chen, Li Zhu, Yong Du, Zhao Ye, Z-X Yan, Linyuan Shen, Yan Wang, Xiaofeng Zhou
article en

Abstract

RNA modifications represent a crucial layer of post-transcriptional regulation, yet their dynamic landscape during testicular maturation remains largely uncharted. In this study, we employed Nanopore Direct RNA Sequencing to generate a comprehensive epitranscriptomic dataset for porcine testicular tissue at pre-sexual and post-sexual maturation stages. This dataset captures the profiles of four RNA modifications (m⁶A, m⁵C, Ψ, and inosine) across these critical developmental time points. We further characterized the global abundance, distribution, and motif features of these modifications. This resource provides a valuable foundation for elucidating the epitranscriptomic mechanisms governing mammalian testicular development and spermatogenesis.

Scientific Data
Sichuan Agricultural University (CN), Ministry of Agriculture and Rural Affairs (CN)
National Natural Science Foundation of China, National Key Research and Development Program of China
Openalex Percentile: Top 11%
RNA modifications and cancer
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