The telomere-to-telomere gap-free reference genome by golden pompano (Trachinotus ovatus) of male and female

Golden pompano (Trachinotus ovatus), a marine fish in the Carangidae family, has a wide geographical distribution and adapts to severe environmental rigours. It is also an economically valuable aquaculture fish. To understand the genetic mechanism of adaption to environmental rigours and improve the production in aquaculture, we assembled the telomere-to-telomere gap-free reference genome by golden pompano (Trachinotus ovatus) of male and female. By combination of ONT ultra-long and PacBio HiFi reads, we assembled 24 chromosomes without any gap.

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Publication Details

Journal
China National GeneBank DataBase
Published
2026-06-30
DOI
https://doi.org/10.26036/cnp0007518
Primary Topic
Telomeres, Telomerase, and Senescence
Type
article
Field-Weighted Citation Impact
0.00
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article

The telomere-to-telomere gap-free reference genome by golden pompano (Trachinotus ovatus) of male and female

冼霖(xianlin)
China National GeneBank DataBase
Telomeres, Telomerase, and Senescence
article

The telomere-to-telomere gap-free reference genome by golden pompano (Trachinotus ovatus) of male and female

冼霖(xianlin)
article en

Abstract

Golden pompano (Trachinotus ovatus), a marine fish in the Carangidae family, has a wide geographical distribution and adapts to severe environmental rigours. It is also an economically valuable aquaculture fish. To understand the genetic mechanism of adaption to environmental rigours and improve the production in aquaculture, we assembled the telomere-to-telomere gap-free reference genome by golden pompano (Trachinotus ovatus) of male and female. By combination of ONT ultra-long and PacBio HiFi reads, we assembled 24 chromosomes without any gap.

China National GeneBank DataBase
Life below water
Openalex Percentile: Top 9%
Telomeres, Telomerase, and Senescence
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