Expanded Allelic Diversity of Non‐Classical <scp> <i>HLA</i> </scp> Class I and <scp> <i>MIC</i> </scp> Loci Identified Using Full‐Gene Hybrid Capture–Based Next‐Generation Sequencing
Non-classical HLA Class I genes (HLA-E, -F, -G, -H) and MHC-related genes (MICA, MICB) regulate NK cell function and immune tolerance, yet their allelic diversity remains underexplored. Using capture-enriched full-gene sequencing of 943 healthy US transplant donors, we identified 26 novel alleles across HLA-E (2), HLA-F (6), HLA-G (4), HLA-H (5), MICA (3), and MICB (6). Each novel allele was identified in a single individual and differs from its closest known allele by a single-nucleotide polymorphism within the coding region. In addition, we confirmed the recently described allele HLA-G*01:01:33 in 16 unrelated donors. In all cases, it consistently co-segregated with HLA-A*34:01:01, HLA-F*01:01:01 and HLA-H*02:27, supporting the presence of a conserved haplotype. These findings expand the catalogue of non-classical HLA and MIC alleles, highlighting capture-enriched full-gene sequencing as a powerful tool for comprehensive immunogenetic profiling.
Authors
- Raja Rajalingam (ORCID: https://orcid.org/0000-0001-8821-7877)
- Itta Krishna Chaaithanya (ORCID: https://orcid.org/0000-0003-0702-2782)
- Nancy Y. Lee (ORCID: https://orcid.org/0000-0003-3044-9522)
- Pawan Kumar Raghav (ORCID: https://orcid.org/0000-0002-2440-7134)
- Carla Wirtz (ORCID: https://orcid.org/0009-0000-3795-6127)
- Denice Kong (ORCID: https://orcid.org/0009-0009-7613-6629)
Institutions
- National Institute for Research in Reproductive Health (IN)
- West Chester University (US)
- University of California, San Francisco (US)
- Academy of Scientific and Innovative Research (IN)
Publication Details
- Journal
- HLA
- Published
- 2026-06-28
- DOI
- https://doi.org/10.1111/tan.70824
- Primary Topic
- Immune Cell Function and Interaction
- Type
- article
- Field-Weighted Citation Impact
- 0.00