Mapping Cassava Production in Uganda

Cassava is a critical staple crop for food security and rural livelihoods in Sub-Saharan Africa, yet high-resolution maps of its distribution remain scarce, particularly for smallholder systems. In this study, we generated a 10 m resolution cassava presence map for Uganda (CM24) by fine-tuning a Random Forest classifier on TESSERA foundation model embeddings derived from Sentinel-1 and Sentinel-2 time series. Using field survey data from the Copernicus4GEOGLAM campaign for training and validation, the model achieved excellent discriminative ability (validation AUC = 0.9532, test AUC = 0.9524). Visual validation against high-resolution satellite imagery confirmed good spatial agreement, capturing both large contiguous fields and small fragmented plots. Comparison with two existing global products (CassavaMap and SPAM2020) and two seasons of national survey data conducted by the Uganda Bureau of Statistics showed that CM24 produced national harvested area estimates that fell between the two survey totals, whereas CassavaMap and SPAM2020 systematically overestimated harvested area by factors of two to three. Our results demonstrate that foundation-model embeddings offer a robust and scalable approach for mapping cassava in heterogeneous smallholder landscapes. The resulting CM24 map provides a spatially explicit tool to support disease surveillance, agricultural monitoring, and food security planning in Uganda and beyond.

Authors

Publication Details

Journal
Apollo
Published
2026-06-27
DOI
https://doi.org/10.17863/cam.131498
Primary Topic
Cassava research and cyanide
Type
article
Field-Weighted Citation Impact
0.00
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article

Mapping Cassava Production in Uganda

Renata Retkutė, Gilligan Christopher A.
Apollo
Cassava research and cyanide
article

Mapping Cassava Production in Uganda

Renata Retkutė, Gilligan Christopher A.
article en

Abstract

Cassava is a critical staple crop for food security and rural livelihoods in Sub-Saharan Africa, yet high-resolution maps of its distribution remain scarce, particularly for smallholder systems. In this study, we generated a 10 m resolution cassava presence map for Uganda (CM24) by fine-tuning a Random Forest classifier on TESSERA foundation model embeddings derived from Sentinel-1 and Sentinel-2 time series. Using field survey data from the Copernicus4GEOGLAM campaign for training and validation, the model achieved excellent discriminative ability (validation AUC = 0.9532, test AUC = 0.9524). Visual validation against high-resolution satellite imagery confirmed good spatial agreement, capturing both large contiguous fields and small fragmented plots. Comparison with two existing global products (CassavaMap and SPAM2020) and two seasons of national survey data conducted by the Uganda Bureau of Statistics showed that CM24 produced national harvested area estimates that fell between the two survey totals, whereas CassavaMap and SPAM2020 systematically overestimated harvested area by factors of two to three. Our results demonstrate that foundation-model embeddings offer a robust and scalable approach for mapping cassava in heterogeneous smallholder landscapes. The resulting CM24 map provides a spatially explicit tool to support disease surveillance, agricultural monitoring, and food security planning in Uganda and beyond.

Apollo
Openalex Percentile: Top 8%
Cassava research and cyanide
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