Molecular Framework Modification in Mass Spectrometry: Atom Exchange, Insertion, and Deletion

The ionization and activation of molecules, as performed using mass spectrometry (MS), have long been known to induce unimolecular rearrangements in gas-phase ions and, in some cases, reorganization of the underlying skeletal framework. Here, we explore skeletal rearrangements occurring from the electrospray ionization process, including atom exchange, insertion, and deletion, within pre-existing ring systems. The Baeyer–Villiger oxidation, the Beckmann rearrangement, and the Favorskii rearrangement are longstanding organic reactions that are here explored in MS, alongside a unique sulfur-for-oxygen exchange reaction within a 2,4,6-triphenylpyrylium scaffold. MS n and high-resolution MS are used to examine four representative transformations of molecular frameworks. Reactions across the four types emphasize the fact that ESI-MS can be intrinsically reactive. Product assignments in each case are supported by exact-mass measurements, isotopic distribution analysis, and MS/MS comparison with authentic standards or by characteristic fragmentation behavior. Beyond demonstrating framework modifications in electrospray droplets, these results point to an expanded suite of reactions for reactive MS derivatization, as well as the development of future strategies for late-stage functionalization.

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Journal
Journal of the American Society for Mass Spectrometry
Published
2026-06-26
DOI
https://doi.org/10.1021/jasms.6c00171
Primary Topic
Mass Spectrometry Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.00

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article

Molecular Framework Modification in Mass Spectrometry: Atom Exchange, Insertion, and Deletion

R. Graham Cooks, Myles Q. Edwards, Dylan T. Holden
Journal of the American Society for Mass Spectrometry
Mass Spectrometry Techniques and Applications
article

Molecular Framework Modification in Mass Spectrometry: Atom Exchange, Insertion, and Deletion

R. Graham Cooks, Myles Q. Edwards, Dylan T. Holden
article en

Abstract

The ionization and activation of molecules, as performed using mass spectrometry (MS), have long been known to induce unimolecular rearrangements in gas-phase ions and, in some cases, reorganization of the underlying skeletal framework. Here, we explore skeletal rearrangements occurring from the electrospray ionization process, including atom exchange, insertion, and deletion, within pre-existing ring systems. The Baeyer–Villiger oxidation, the Beckmann rearrangement, and the Favorskii rearrangement are longstanding organic reactions that are here explored in MS, alongside a unique sulfur-for-oxygen exchange reaction within a 2,4,6-triphenylpyrylium scaffold. MS n and high-resolution MS are used to examine four representative transformations of molecular frameworks. Reactions across the four types emphasize the fact that ESI-MS can be intrinsically reactive. Product assignments in each case are supported by exact-mass measurements, isotopic distribution analysis, and MS/MS comparison with authentic standards or by characteristic fragmentation behavior. Beyond demonstrating framework modifications in electrospray droplets, these results point to an expanded suite of reactions for reactive MS derivatization, as well as the development of future strategies for late-stage functionalization.

Journal of the American Society for Mass Spectrometry
Harvard University (US), Purdue University West Lafayette (US), Harvard University Press (US)
Stanford University, National Institutes of Health, Air Force Office of Scientific Research
Openalex Percentile: Top 12%
Mass Spectrometry Techniques and Applications
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Molecular Framework Modification in Mass Spectrometry: Atom Exchange, Insertion, and Deletion — R. Graham Cooks, Myles Q. Edwards, et al. · Journal of the American Society for Mass Spectrometry (2026) | TGRS Research Map | TGRS