A study in scarlet: sixteen new taxa of red Arcyria - Supplementary files

This collection contains supplementary files: Fig. S1. ASAP analysis based on de novo 18S alignment of A. denudata sensu lato Fig. S2. ASAP analysis based on de novo 18S alignment of A. denudatoides species complex Fig. S3. Bray-Curtis similarity matrix based on the abundances of barcoded Arcyria specimens. The colour scale displays the similarity between two realms. Dendrogram on the left is built by the group-average linkage of Bray-Curtis similarity values. File S1. Alignment of 18S and EF1-α used to generate the phylogeny in Fig. 1. File S2. 18S alignment of A. denudata sensu lato File S3. 18S alignment of A. denudatoides species complex File S4. Phylogenetic tree visualized on the Fig. 1. File S5. R code used for phylogenetic tree visualization and the biogeographic analyses. Table S1. Primary data on specimens used in this study Table S2. Genbank accession numbers of sequences included in this study.

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Publication Details

Journal
Zenodo (CERN European Organization for Nuclear Research)
Published
2026-06-26
DOI
https://doi.org/10.5281/zenodo.20929821
Primary Topic
Lichen and fungal ecology
Type
article
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article

A study in scarlet: sixteen new taxa of red Arcyria - Supplementary files

Martin Schnittler, Iryna Yatsiuk, Myriam de Haan, Dmytro Leontyev et al.
Zenodo (CERN European Organization for Nuclear Research)
Lichen and fungal ecology
article

A study in scarlet: sixteen new taxa of red Arcyria - Supplementary files

Martin Schnittler, Iryna Yatsiuk, Myriam de Haan, Dmytro Leontyev, Anton Savchenko
article en

Abstract

This collection contains supplementary files: Fig. S1. ASAP analysis based on de novo 18S alignment of A. denudata sensu lato Fig. S2. ASAP analysis based on de novo 18S alignment of A. denudatoides species complex Fig. S3. Bray-Curtis similarity matrix based on the abundances of barcoded Arcyria specimens. The colour scale displays the similarity between two realms. Dendrogram on the left is built by the group-average linkage of Bray-Curtis similarity values. File S1. Alignment of 18S and EF1-α used to generate the phylogeny in Fig. 1. File S2. 18S alignment of A. denudata sensu lato File S3. 18S alignment of A. denudatoides species complex File S4. Phylogenetic tree visualized on the Fig. 1. File S5. R code used for phylogenetic tree visualization and the biogeographic analyses. Table S1. Primary data on specimens used in this study Table S2. Genbank accession numbers of sequences included in this study.

Zenodo (CERN European Organization for Nuclear Research)
Estonian University of Life Sciences (EE), University of Tartu (EE)
Life in Land
Openalex Percentile: Top 5%
Lichen and fungal ecology
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