Local calibration of bulk density models for agricultural soils in an inter-Andean valley of the Peruvian Central Highlands

Soil bulk density (BD) is an essential indicator of soil quality, reflecting compaction, porosity, and water and nutrient retention capacity. However, its direct determination is costly and labor-intensive. This study developed and calibrated predictive models for BD in agricultural soils of an inter-Andean valley of the Peruvian Central Highlands using physicochemical properties (pH, electrical conductivity, organic matter, P, K, sand, silt and clay). Sixty-seven soil samples were analyzed using five modeling approaches: multiple linear regression (MLR), partial least squares regression (PLSR), artificial neural networks (ANN), classification and regression trees (CART), and random forest (RF). model performance was evaluated through fivefold cross-validation and goodness-of-fit metrics (coefficient of determination, R2; root mean square error, RMSE; mean absolute error, MAE; and performance to deviation, RPD). The RF model gave the best overall fit among the evaluated models (R2 = 0.621, RMSE = 0.0862 g·cm−3, MAE = 0.0693 g·cm−3, RPD = 1.64), outperforming MLR (R2 = 0.614), PLSR (R2 = 0.608), ANN (R2 = 0.584) and CART (R2 = 0.514). Local calibrations significantly reduced errors compared to standard pedotransfer functions, which typically have standard errors of 0.14–0.20 g·cm–3 and R2 < 0.60. Results demonstrate the potential of local models, particularly machine learning approaches, to generate rapid, low-uncertainty BD estimates supporting soil fertility management and sustainable agricultural planning.

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Journal
ENGINEERING Agriculture
Published
2026-06-26
DOI
https://doi.org/10.15302/j-fase-2027723
Primary Topic
Soil Geostatistics and Mapping
Type
article
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article

Local calibration of bulk density models for agricultural soils in an inter-Andean valley of the Peruvian Central Highlands

Esthefany Gavino, Erika Garcia, Dennis Ccopi, Samuel E. PIZARRO et al.
ENGINEERING Agriculture
Soil Geostatistics and Mapping
article

Local calibration of bulk density models for agricultural soils in an inter-Andean valley of the Peruvian Central Highlands

Esthefany Gavino, Erika Garcia, Dennis Ccopi, Samuel E. PIZARRO, Edilson REQUENA, Itala FLORES
article en

Abstract

Soil bulk density (BD) is an essential indicator of soil quality, reflecting compaction, porosity, and water and nutrient retention capacity. However, its direct determination is costly and labor-intensive. This study developed and calibrated predictive models for BD in agricultural soils of an inter-Andean valley of the Peruvian Central Highlands using physicochemical properties (pH, electrical conductivity, organic matter, P, K, sand, silt and clay). Sixty-seven soil samples were analyzed using five modeling approaches: multiple linear regression (MLR), partial least squares regression (PLSR), artificial neural networks (ANN), classification and regression trees (CART), and random forest (RF). model performance was evaluated through fivefold cross-validation and goodness-of-fit metrics (coefficient of determination, R2; root mean square error, RMSE; mean absolute error, MAE; and performance to deviation, RPD). The RF model gave the best overall fit among the evaluated models (R2 = 0.621, RMSE = 0.0862 g·cm−3, MAE = 0.0693 g·cm−3, RPD = 1.64), outperforming MLR (R2 = 0.614), PLSR (R2 = 0.608), ANN (R2 = 0.584) and CART (R2 = 0.514). Local calibrations significantly reduced errors compared to standard pedotransfer functions, which typically have standard errors of 0.14–0.20 g·cm–3 and R2 < 0.60. Results demonstrate the potential of local models, particularly machine learning approaches, to generate rapid, low-uncertainty BD estimates supporting soil fertility management and sustainable agricultural planning.

ENGINEERING AgricultureVol. 14(2)
National Agricultural Research Institute (PG)
Zero hunger
Openalex Percentile: Top 11%
Soil Geostatistics and Mapping
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