Beyond resistance and tolerance: rethinking evolutionary responses to antibiotics from the perspective of individual bacterial cells

Antibiotic resistance and tolerance are thought to be the key phenotypic traits that underpin evolutionary adaptation to antibiotics. However, the concepts of resistance and tolerance can be traced back to population-level assays developed by Fleming in the 1920s. Recent single-cell studies have shown that population responses to antibiotics are driven by a dynamic interplay between cell birth and death, challenging the concepts of resistance and tolerance at the level of individual cells. In this Perspective, we show that ecological models of population growth provide a tool to connect the population-level responses to antibiotics measured by classic assays (ie growth rate) with individual cellular phenotypes (ie birth and death rates). In this model, resistance and tolerance represent emergent properties of bacterial populations that change as an indirect consequence of selection on cell birth and death rates. We argue that this model challenges established concepts and highlights the need to better understand evolutionary responses to antibiotics from the perspective of cellular phenotypes.

Authors

Institutions

Publication Details

Journal
Nature Communications
Published
2026-06-26
DOI
https://doi.org/10.1038/s41467-026-74829-9
Primary Topic
Evolution and Genetic Dynamics
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Beyond resistance and tolerance: rethinking evolutionary responses to antibiotics from the perspective of individual bacterial cells

Rafael Peña‐Miller, R. Craig MacLean
Nature Communications
Evolution and Genetic Dynamics
article

Beyond resistance and tolerance: rethinking evolutionary responses to antibiotics from the perspective of individual bacterial cells

Rafael Peña‐Miller, R. Craig MacLean
article en

Abstract

Antibiotic resistance and tolerance are thought to be the key phenotypic traits that underpin evolutionary adaptation to antibiotics. However, the concepts of resistance and tolerance can be traced back to population-level assays developed by Fleming in the 1920s. Recent single-cell studies have shown that population responses to antibiotics are driven by a dynamic interplay between cell birth and death, challenging the concepts of resistance and tolerance at the level of individual cells. In this Perspective, we show that ecological models of population growth provide a tool to connect the population-level responses to antibiotics measured by classic assays (ie growth rate) with individual cellular phenotypes (ie birth and death rates). In this model, resistance and tolerance represent emergent properties of bacterial populations that change as an indirect consequence of selection on cell birth and death rates. We argue that this model challenges established concepts and highlights the need to better understand evolutionary responses to antibiotics from the perspective of cellular phenotypes.

Nature CommunicationsVol. 17(1)
University of Oxford (GB), Science Oxford (GB), Universidad Nacional Autónoma de México (MX)
UK Research and Innovation, Engineering and Physical Sciences Research Council, Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México
Openalex Percentile: Top 7%
Evolution and Genetic Dynamics
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.