Pyruvate-formate lyase-derived formate regulates the response of Salmonella Typhimurium to meropenem and ciprofloxacin

Salmonella enterica serovar Typhimurium (STM) employs various strategies to endure antibiotic stress, but the contribution of central metabolites to resistance remains insufficiently characterized. In this work, we identify intracellular formate, produced by pyruvate-formate lyase (PflB), as a key determinant of STM susceptibility to meropenem and ciprofloxacin. Deletion of pflB disrupts cellular pH homeostasis and is associated with impaired efflux pump function, increased reactive oxygen species, and membrane depolarization, collectively correlating with heightened antibiotic sensitivity. Supplementing extracellular formate reverses these phenotypes. Mechanistically, pH imbalance activates the RpoE- csrB regulatory pathway, leading to reduced expression of efflux pump genes acrB and tolC , while extracellular formate engages the BarA/SirA two-component system to further influence the CsrA- csrB network. Overall, our results position formate as a metabolic driver of antibiotic outcomes in STM and highlight it as a potential target for mitigating resistance.

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Publication Details

Journal
Cell Reports
Published
2026-06-25
DOI
https://doi.org/10.1016/j.celrep.2026.117611
Primary Topic
Bacterial Genetics and Biotechnology
Type
article
Field-Weighted Citation Impact
0.00

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article

Pyruvate-formate lyase-derived formate regulates the response of Salmonella Typhimurium to meropenem and ciprofloxacin

Debapriya Mukherjee, Sakshi Vasant Wagle, Dipshikha Chakravortty, Abhishek Biswas et al.
Cell Reports
Bacterial Genetics and Biotechnology
article

Pyruvate-formate lyase-derived formate regulates the response of Salmonella Typhimurium to meropenem and ciprofloxacin

Debapriya Mukherjee, Sakshi Vasant Wagle, Dipshikha Chakravortty, Abhishek Biswas, Pallab Ghosh
article en

Abstract

Salmonella enterica serovar Typhimurium (STM) employs various strategies to endure antibiotic stress, but the contribution of central metabolites to resistance remains insufficiently characterized. In this work, we identify intracellular formate, produced by pyruvate-formate lyase (PflB), as a key determinant of STM susceptibility to meropenem and ciprofloxacin. Deletion of pflB disrupts cellular pH homeostasis and is associated with impaired efflux pump function, increased reactive oxygen species, and membrane depolarization, collectively correlating with heightened antibiotic sensitivity. Supplementing extracellular formate reverses these phenotypes. Mechanistically, pH imbalance activates the RpoE- csrB regulatory pathway, leading to reduced expression of efflux pump genes acrB and tolC , while extracellular formate engages the BarA/SirA two-component system to further influence the CsrA- csrB network. Overall, our results position formate as a metabolic driver of antibiotic outcomes in STM and highlight it as a potential target for mitigating resistance.

Cell ReportsVol. 45(7)
Indian Institute of Science Education and Research Thiruvananthapuram (IN), Indian Institute of Science Bangalore (IN)
Department of Atomic Energy, Government of India
Life below water
Openalex Percentile: Top 7%
Bacterial Genetics and Biotechnology
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Pyruvate-formate lyase-derived formate regulates the response of Salmonella Typhimurium to meropenem and ciprofloxacin — Debapriya Mukherjee, Sakshi Vasant Wagle, et al. · Cell Reports (2026) | TGRS Research Map | TGRS